| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4885 |
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| Symbol | |
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| ID | 7971579 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 5203002 |
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| End bp | 5204138 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795480 |
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| Product | Citrate transporter |
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| Protein accession | YP_002946755 |
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| Protein GI | 239817845 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1055] Na+/H+ antiporter NhaD and related arsenite permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAACTCGC CGGCCGCTGA AACGCAGGCG CGGGCAGCCG CGCCCTCCGA ACACGGCGGC
GGCAACGGCC TGCTGTGGCT GCTGGCCGCC GTCGCGCTGC TGTTCGCCTT CCTGCGCCCG
CGCGCGCCGA TGGACTGGCT CCGGCTGGTC GACTGGCAGA CCGTGGGCGC GCTCGCGGGG
CTGCTCGCGA TCACGCAGGG GGTCGAGAAA AGCGGCATGC TGCAGGCCGC CGCGCAGCGC
CTGCTCGCGC GCACGCACAG CCAGCGCAGC CTGGCGCTGC TGCTGACCGC CAGCGCGGCG
TTCCTGTCCG CGCTGGTGAC CAACGACGTG AGCCTGTTCC TGCTGGTGCC GCTCACGCGC
GTGCTCGCCA GCCAGGCGCA CCTGCCGCTC GCGCGGCTGG TGGTGCTCGA GGCACTGGCG
GTCAATGCGG GTTCGGCCCT CACGCCCATC GGCAATCCGC AGAACCTTTA CCTCTGGCAC
CGCTCGGGCG AGAGCTTCGT CGGCTTCATG GGCATGATGC TGCCGACCGT GGCCGTGATG
CTGTTTTGGC TCTTCGCGGC GGCCTGGCTG CTGGTGCCGC GCACGCCCAT CGCGCTCAAG
CCCGAGACCG AAGCCGTGCC GGTGCAGCCG CGCCTCCTTG CACTGGCGGG CGTCCTGTTC
ATCGGCTTCG TGGTCGCGCT CGACCGGCAC TGGCTGCTCG CGGGCCTGGG CGTGGTGTTC
GCGGTGTTCC TGCTGAGCTA TCCGCGCGTG CTGAAAGACA TCGACTGGGC GCTGCTCGCG
ATCATTGCGC TGATGTTCGT GGACCTGCGC CAGCTGGCCG AACTGCAGGC GATCGGGTCG
CTGCTGAACC ACTGGCCCAT CACCGAAGGA TGGCGCGCCT ACCTTGCCGC CATCGTCACT
TCGCAATTCA TCAGCAACGT GCCGGCGGCG ATCCTGCTCG ACGGCCATGT GCGCGACCTG
CCGGCGCTCG CGGCCGGCGT GAGCGTGGGC GGCTTCGGCT GCGTGCTGGG CTCGCTGGCC
AACCTGATCG CGCTGCGCCT GGCCAGGCTG CCGCACGGGC TGCGCGAGTT CCATCGCATC
AGCATTCCGT TCCTGCTGGT GTGCGCGGCC TCGGCGCTGC TGCTGCGGCT CGGGTGA
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| Protein sequence | MNSPAAETQA RAAAPSEHGG GNGLLWLLAA VALLFAFLRP RAPMDWLRLV DWQTVGALAG
LLAITQGVEK SGMLQAAAQR LLARTHSQRS LALLLTASAA FLSALVTNDV SLFLLVPLTR
VLASQAHLPL ARLVVLEALA VNAGSALTPI GNPQNLYLWH RSGESFVGFM GMMLPTVAVM
LFWLFAAAWL LVPRTPIALK PETEAVPVQP RLLALAGVLF IGFVVALDRH WLLAGLGVVF
AVFLLSYPRV LKDIDWALLA IIALMFVDLR QLAELQAIGS LLNHWPITEG WRAYLAAIVT
SQFISNVPAA ILLDGHVRDL PALAAGVSVG GFGCVLGSLA NLIALRLARL PHGLREFHRI
SIPFLLVCAA SALLLRLG
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