Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4653 |
Symbol | |
ID | 7972864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4944579 |
End bp | 4945310 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644795238 |
Product | putative cytochrome c |
Protein accession | YP_002946524 |
Protein GI | 239817614 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACGAAGA ACAACGTCGT CCGCCGCATC GTCGCAATTG CATTGCTGCT GCTGAGCCAC GGCATCTGCG CCATGGCGGC AACACCTGCC CCGCCAGCCG CCCCTTCCGC GAGCGGCATC GAGCAGCGCG TGGCCGCCTG CATCGCCTGC CACGGGCGCG AAGGCGCGAC CACCAATGCC GGCTACTTTC CGCGCCTCTC GGGCAAGCCC GCGGGCTACC TGTTCAACCA GCTGCGCAGC TTTCGCGACG GCCGGCGCTT CAATGCCGAC ATGAACTACA TGGTGCAGCA CCTCTCCGAT GCCTACCTGA TGGAAATGGC CGAATACTTC GCGGGCCTGG ACCTGCCCTA CCCGCCCGTC TCGCCCGTGA GCGACGCGCC ACCCGCGCAG CTGGCGCGCG GCCGCCAGCT GGCGCTCGAA GGCGATGCGG CGCGGCAAAT TCCCGCCTGC GTGCAATGCC ACGGTGCCGC GCTCACCGGC GTGCAGCCGG CCATTCCGGG GCTGCTGGGG CTGCCCCGCC TCTACGTGTC TTCGCAGCTG GGCGCCTGGC TCACCAGCGA GCGGCATGCA CTCGCACCCG ACTGCATGGC CGACATCGGC CGCCGCATGA CCACAGCCGA CATCAACGCC GTGGCCAGCT GGCTCGCGGT GCAGCCGATG CCGGCCGATC CGAAGCCTGC CGCATCGCTG CCCGCCGCAC TGCCGATGCG CTGCGGCGGC ATGCCGAAGT GA
|
Protein sequence | MTKNNVVRRI VAIALLLLSH GICAMAATPA PPAAPSASGI EQRVAACIAC HGREGATTNA GYFPRLSGKP AGYLFNQLRS FRDGRRFNAD MNYMVQHLSD AYLMEMAEYF AGLDLPYPPV SPVSDAPPAQ LARGRQLALE GDAARQIPAC VQCHGAALTG VQPAIPGLLG LPRLYVSSQL GAWLTSERHA LAPDCMADIG RRMTTADINA VASWLAVQPM PADPKPAASL PAALPMRCGG MPK
|
| |