| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4638 |
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| Symbol | |
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| ID | 7972848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4928717 |
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| End bp | 4929700 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644795222 |
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| Product | inner-membrane translocator |
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| Protein accession | YP_002946509 |
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| Protein GI | 239817599 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAG CCGCCGCCAC CTCCGCCCCG CCCTCCGCCC TGAAGGGCCA GCTGGGCACC
TACGTGGGCC TGACCGTCGT GCTCGTGGGC ATGGTCGCGC TCTTCGGCAC GCTGAGCGAA
TATTTCCTCA CGCGTGAAAC CTTCATCTCC ATTGCCAACG AGATTCCCGC GCTCGCGGTG
ATGGCCGTGG GCATGACCTT CGTGCTGATC ATCGCGGGCA TCGACCTGTC GGTGGGCTCG
GTGCTTGCGC TGAGCGCGGC GGTCACGGCC GCCGCCATCC TCCAGTGGAA GCTCTCGGTG
CCGATGGCCG CCGCGCTGGG CCTGGCCACC GGCCTGGTGT GCGGCAGCGT GACGGGCGCG
GTGTCGGTCG CATGGCGGCT GCCGAGCTTC ATCGTCTCGC TGGGCATGCT GGAGGCGGTG
CGCGGCGGCG CCTACCTGGT GACCGATTCG CGCACGCAGT ACGTGGGCGA CGCGATCTCG
GGCCTGGCCG CGCCGTGGAT CGGCGGCATT TCCGCGGCCT TCGTGCTCGC GGTGGTGCTG
GTGGCCGCCG GCCAGCTGGT GCTCACGCGC ACGGTGTTCG GCCGGCACGT GGTGGGCATC
GGCACCAACG AAGAAGCGAT GCGGCTCGCG GGCATCGATC CGCGCCCGAT CCGCATCATC
GTGTTTGCCG CCACCGGCCT GCTGGCGGGC CTGGCGGGCC TGATGCAGTC GGCGCGGCTC
GAAGCGGCCG ACCCCAATGC CGGCGTCGGC ATCGAGCTGC AGGTGATTGC GGCCGTGGTG
ATCGGCGGCA CCAGCCTCAT GGGCGGGCGC GGCTCGGTGG TCAACACTTT CTTCGGCGTG
CTGATCATCG CGGTGCTCGA GGCCGGGCTT GCGCAGGTGG GCGCCAGCGA GCCGAGCAAA
CGCATCATCA CCGGCGCGGT CATCGTGGTT GCGGTGATCA TCGACACCTT GCGCCAGCGC
CGGGCCGATC GCCGCCTGGC CTGA
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| Protein sequence | MTAAAATSAP PSALKGQLGT YVGLTVVLVG MVALFGTLSE YFLTRETFIS IANEIPALAV
MAVGMTFVLI IAGIDLSVGS VLALSAAVTA AAILQWKLSV PMAAALGLAT GLVCGSVTGA
VSVAWRLPSF IVSLGMLEAV RGGAYLVTDS RTQYVGDAIS GLAAPWIGGI SAAFVLAVVL
VAAGQLVLTR TVFGRHVVGI GTNEEAMRLA GIDPRPIRII VFAATGLLAG LAGLMQSARL
EAADPNAGVG IELQVIAAVV IGGTSLMGGR GSVVNTFFGV LIIAVLEAGL AQVGASEPSK
RIITGAVIVV AVIIDTLRQR RADRRLA
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