| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4609 |
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| Symbol | |
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| ID | 7973307 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4896207 |
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| End bp | 4897163 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644795193 |
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| Product | transcriptional regulator, AraC family |
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| Protein accession | YP_002946480 |
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| Protein GI | 239817570 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATGTCT TGTCGGACGT GCTGCGGACC ATCCGCCTGG AGGGCGCGCT GTTCCTGAAC
GGGGACATGC ATGCGCCCTG GTGCTTCAAG GTGCCCAAGG GCGCGCACAT GGCGCAATTG
CTCAGGCCCG GCGCGCAGCG GCTGGCCATC TGCCACCTCG TGCTGCAAGG CGAATGCTGG
GCCCAGGTCG ACGGCGGGGA GCCGATCCGC GCCCATGCCG GCGACGTCAT CGCCGTGCCG
CATGGCGACT CGCATGTGGT GGGCAGCGGC CTGCTCCAGG CAGCGGTGGA CGTGGCGCAT
GTGGTGAACC CGCGGGCGCC CGAGCTGGAG CGCATCCGCT ACGGCGGCAA TGGCGACCGC
ACGGTGCTGG TGTGCAGCTG GTTCGCCTAC GAAGGCGATG CGCCCAACCC TCTCATGGCG
AACATTCCGC GCCTGTTCAC CACGTCGCTG CGCAGCAGGC CGGCGGGCCC GTGGATCGAG
CAGTCCGTCA ACTTCGTGCT GGGCGATGCG GCTTCGCACA CGCCCGGTTC CGAGATGGTC
GCCGCCAAGG TGGCGGAAGT GCTGTTCGCC GAAGTGCTGC GCGGCTACAT CGAATCCATG
CCCGCCAACA ACCCCGGCTG GCTCGCGGGC CTGCGCGACC CCCACGTGAG CCGCTGCCTG
GCGCTGATGC ACGGCGATCC CGCCCGCAAC TGGACGGTCG ACGCGCTGGC GCAGGAAATC
CATGTCTCGC GCAGCGTGCT GGCGGACCGC TTCGCCGAAC TGGTGGGCGC GCCGCCCATG
CACTACCTGA CGCGCTGGCG CATGATCCTG GCCGCCGGCA TGCTGCGAAA GGACCAGGGC
AACCTGGCGC GCATTGCCGA AGATGTCGGC TACGAGTCGG AAGCGGCCTT CAACCGCGCG
TTCAAACGCG AGTACGGGGT GTCGCCCGGG GTCTGGCGGC AGAACGGGGC CGGGTGA
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| Protein sequence | MDVLSDVLRT IRLEGALFLN GDMHAPWCFK VPKGAHMAQL LRPGAQRLAI CHLVLQGECW
AQVDGGEPIR AHAGDVIAVP HGDSHVVGSG LLQAAVDVAH VVNPRAPELE RIRYGGNGDR
TVLVCSWFAY EGDAPNPLMA NIPRLFTTSL RSRPAGPWIE QSVNFVLGDA ASHTPGSEMV
AAKVAEVLFA EVLRGYIESM PANNPGWLAG LRDPHVSRCL ALMHGDPARN WTVDALAQEI
HVSRSVLADR FAELVGAPPM HYLTRWRMIL AAGMLRKDQG NLARIAEDVG YESEAAFNRA
FKREYGVSPG VWRQNGAG
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