Gene Vapar_4593 details

Gene Information

• Locus tag: Vapar_4593
• ID: 7973291
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: -
• Start bp: 4866020
• End bp: 4867894
• Gene Length: 1875 bp
• Protein Length: 624 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 644795177
• Product: Site-specific DNA-methyltransferase (adenine-specific)
• Protein accession: YP_002946464
• Protein GI: 239817554
• COG category: [L] Replication, recombination and repair
• COG ID: [COG2189] Adenine specific DNA methylase Mod

Plasmid Coverage information

• Num covering plasmid clones: 15
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACGATGC AGAAGATCGC GGTGACCGCT CCCGAGGCCC AAAGTGCGAA CGTGACCGCC 
GACAATCTCG CCAAGCTTAG GCAGTTGTTC CCCGAACTCA TCACTGAGGG CCCCAACGGT 
GCTGAAGTCA ACGTAAACGT TCTCAAGGCG CTGGTGGGCG ACCGAACGGC TATGGATGCC 
GACGAGAAGT ATGGTCTCAA CTGGCATGGC AAGCGTCAGG CGCGAAAGCT GGCGCTGACG 
CCCAGTACCG GGACGCTTCT TCCATGCCCC GAAGACAGCG TTGATTGGGA TACGACCCAG 
AACCTAATGA TTGAAGGCGA CAACCTGGAA GTGCTCAAGC TCCTGCAAAA GAGCTACGCC 
GGAAAAATCA AGCTGATCTA CATTGATCCC CCGTACAACA CCGGCAAGGA CTTCGTTTAC 
CCGGATAACT TCCAGGACAG CATCAAGAAC TATCTGGAAC TTACTGGCCA GGCCGAAGGT 
GGCCGGAAGA TCACCAGCAA CACAGACGCG AGTGGGCGAT TTCATACTGA CTGGCTCAGC 
ATGATTTACC CCAGACTTAA GCTCGCTTCG AGCTTGCTTT GCCAAGAGGG GCATATCTTC 
ATCAGCATTG ACGACAGCGA GGTCGCCAAT CTTCGAGCCG TTTGCAACGA GGTTTTCGGT 
GAAGAAAATT TCGTTGGCTG CATATCTTGG CAGAAGACTT ACAGCCCGGC CAACGACAAG 
AAGGGCATTG ACGCGATGCA CGACTACGTA GTCGTCTACC AGCGGAGTGA CGCTGCGCGA 
ATTAACTTGC TTCCGCGTAC TGCGAAGCAA GACGACGCCT ACACCAATCC GGACGACGAT 
CACCGTGGCC CTTGGAAGGC GGTGGATGCG ACGCGCGCTG AGCATCGGGA CTATGCCTTT 
TATCCCATTC AAACCCCCAG TGGGCGCGAG GTTTGGCCGG CGCAAGGACG GAGCTGGGTA 
TTTACTAAGG AAGAGGTTCC GGGACTCGTG GCAGAGAGCC GTCTTTGGTT TGGCAAAGAT 
GGTTCGAGCA AGCCATCCAA GAAGTTGTTC CTTACCGAAG TGAAGCAAGG CGTAGTGCCC 
ACAACCTGGT GGACGCACGA AGATGCCGGC CACAACGACG AGGCGAAGAA GGAGTTGAAG 
GCCTTGTTCA CTGAAACGCT TCCGTTCGAC ACGCCAAAGC CGACAAGGTT GATTCAGCGA 
ATTCTTCAGA TCGGCACCAC GGGCAATGGC GGCGAAGTCG TGCTTGACTT TTTCGCCGGC 
AGCGGTACCA CGGCCCAGGC GGTCCTTACG GCGAACCTGG CCGACAAGGG GAACAGGCGA 
TTCGTATTGG TGCAATTGCC AGAGCCCACG GAGAACAAGC AGTTCCCCAC AATCGCGAAC 
GTTACGAGCG AGCGGATACG CCGTGTTGCC GCTGATCTTC GAAAGAAGGG TAGCAACGGC 
GATACAGGAT TTCGGTCGTT CAAACTTGGT AGTTCGAACA TTCGTGCCTG GAACCCTGAC 
CCTGCCGCTT TGGACGATTC TCTATTTGCC CACCAGGACC ATTTGGTTGA GAACCGCACT 
GAGTCTGATG TCTTGTATGA ACTGCTGATC AAGCTCGGCC TTGACCTGTG CGTTCCCATC 
GCCCAGCGAG TGGTCGCTGG CAAGGAGATT CATTCGGTCG GTGGTGGCGT ATTGATGGCC 
TGCTTGGCAG CGCACATTGA GGCTGCCGAG GTCGAGGCCG TTGCTCACGG AATTGCTACG 
TGGCGCAAAG AACTGGCGCC GGCTGGCGAC ACGACCTGTG TTTTCCGTGA CAGCGCCTTT 
GCAGATGACG TGGCCAAGAC CAACATGGCG GCGATCCTTG AACAGAACGG CATCGCAACG 
GTGCGCAGCC TGTGA 

 

Protein sequence

MTMQKIAVTA PEAQSANVTA DNLAKLRQLF PELITEGPNG AEVNVNVLKA LVGDRTAMDA 
DEKYGLNWHG KRQARKLALT PSTGTLLPCP EDSVDWDTTQ NLMIEGDNLE VLKLLQKSYA 
GKIKLIYIDP PYNTGKDFVY PDNFQDSIKN YLELTGQAEG GRKITSNTDA SGRFHTDWLS 
MIYPRLKLAS SLLCQEGHIF ISIDDSEVAN LRAVCNEVFG EENFVGCISW QKTYSPANDK 
KGIDAMHDYV VVYQRSDAAR INLLPRTAKQ DDAYTNPDDD HRGPWKAVDA TRAEHRDYAF 
YPIQTPSGRE VWPAQGRSWV FTKEEVPGLV AESRLWFGKD GSSKPSKKLF LTEVKQGVVP 
TTWWTHEDAG HNDEAKKELK ALFTETLPFD TPKPTRLIQR ILQIGTTGNG GEVVLDFFAG 
SGTTAQAVLT ANLADKGNRR FVLVQLPEPT ENKQFPTIAN VTSERIRRVA ADLRKKGSNG 
DTGFRSFKLG SSNIRAWNPD PAALDDSLFA HQDHLVENRT ESDVLYELLI KLGLDLCVPI 
AQRVVAGKEI HSVGGGVLMA CLAAHIEAAE VEAVAHGIAT WRKELAPAGD TTCVFRDSAF 
ADDVAKTNMA AILEQNGIAT VRSL