Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4580 |
Symbol | |
ID | 7973278 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 4842679 |
End bp | 4843968 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 644795165 |
Product | metallophosphoesterase |
Protein accession | YP_002946452 |
Protein GI | 239817542 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0420] DNA repair exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATTTCA AGTTCATTCA CGCGGCAGAT TTGCACATCG ACAGCCCGAT GCGCGGTTTG AGCGCATATG ACGGAGCGCC GCTGGAGCGA CTTCGGAGTG CCACGAGGCA AACCCTGATA TCCCTCGTCG ACCTGGCGAT CGAAGAGCAG GTGGCTTTGG TTTTGTATGT GGGGGATATT TTTGACGGCG ATTGGGCTGA CTTTCACACT GGGCAGTTCT TTCGGGAGCA GAACGTCCGC TTGGTGCGCG AGGGCATTCG CGTCTACATC GTCAAGGGCA ACCACGACGC GGAAAGCCAG ATTACCAAGG TGCTGCCCAA GGTCGAAGGC GTTCACATCT TTGACCACAA ACGCTGCGAG AGTCAGGAGA TCCCTGAGCT GAAAGTCGCG TTGCATGGCC AGAGTTTCAA GCAGCGAGCG GTGACCGATG ATCTTGCCGC AGACTACCCG GTCGCCAAGG AAGATTGGTT CAACATCGGG CTTCTGCATA CCTGCCTGAC GCCCGAAACT GCCGGTACTC ATTTACCTTA TGCACCAACT TCGGTGACGA CCTTGGCCTC TAAGGGCTAT GACTACTTCG CACTGGGACA TGTGCATCAA CGTCAGGTGG TGCGGGAGGA CAGTCCGCGG ATAGTCTTTC CCGGCAACCT GCAGGGCCGC CACGCCAATG AGCCCGGCAC GAAGGGCTGC GAATTGGTTA CTGTTCGCGA CGGCCACATC GAATCCCAGC ACGTGAGCCT TGAGCGCGTG CGCTGGCACC GACTTGCCAT TGATGCGACT GACTTGGCGA ATGTGGATAT GCTGGCTGTG GCCTGCGCGG CGCAGTTGCA GGCCCAGTTC TCGGATGCGC CCGAGCCGCT CCACGCCGTG CGTGTGAAGG TGCACGGCCA GTCGGAACTC GCTCGTATCG AAGCCGCACA ACGTGGAACT GTCGAAGCGG CGGTGCGAGC CGCCGCACAG GACCTACAGG GCTTGGACGT GTGGATCGAG AAGGTCGAGC TGGAGTTGAG TGCCCCGGTG GACCGAACGG AGCTGGCACG CCGGGGTGAT GCGCTCAGCG AAGTGGTGCG ATTGGTCGAT GAATTGGCCG GCGATGATAT TGCGGTGCTG ACATGGGTCC GTGCCGAACT ACAGGACTTG AAGGAGCTGC CCGTCGAACT TACCAGCCTG GCGCCTGCGA GCTTGGACGC AGATGCGCTG CGGGAGCTGC TGGCCGATGC TGAGGCTACG GTCCTGGCGA AGATGCCGGT CGGGAAGTCC GATCAGACAA AACAGGAGAA GGCGACATGA
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Protein sequence | MDFKFIHAAD LHIDSPMRGL SAYDGAPLER LRSATRQTLI SLVDLAIEEQ VALVLYVGDI FDGDWADFHT GQFFREQNVR LVREGIRVYI VKGNHDAESQ ITKVLPKVEG VHIFDHKRCE SQEIPELKVA LHGQSFKQRA VTDDLAADYP VAKEDWFNIG LLHTCLTPET AGTHLPYAPT SVTTLASKGY DYFALGHVHQ RQVVREDSPR IVFPGNLQGR HANEPGTKGC ELVTVRDGHI ESQHVSLERV RWHRLAIDAT DLANVDMLAV ACAAQLQAQF SDAPEPLHAV RVKVHGQSEL ARIEAAQRGT VEAAVRAAAQ DLQGLDVWIE KVELELSAPV DRTELARRGD ALSEVVRLVD ELAGDDIAVL TWVRAELQDL KELPVELTSL APASLDADAL RELLADAEAT VLAKMPVGKS DQTKQEKAT
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