Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4514 |
Symbol | |
ID | 7972803 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4764290 |
End bp | 4765150 |
Gene Length | 861 bp |
Protein Length | 286 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644795103 |
Product | hypothetical protein |
Protein accession | YP_002946390 |
Protein GI | 239817480 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGGCCCCCA CGCCTCCCAC ACAAGCTTTC CCCGTTGGGC AGGAAAGAAG CGCAGAGTTG CTGCGCAATC TTCAGTCGCA GGCTCGGTAC CTGTTCCGCG AAGACGAGTT CGCCCGCCAC ACGGGCCGCG AACCGGGCGG CCCCGCGTCC CAGATGGCGC TGCAGCGCCT TTCCAGGGCG GGACGCATCG TATTGGCCCA GAAGAACGCG GCCCGCTGGC TCATCGTACC TCCGGAGCAA GCGCACTATG GCGCCCCACC AGTCGACTGG TGGCTGGATG ACCTCATGCG CGACCAGGAA CCAGCGTACT ACCTGGCCCT TCTGAGCGCC GCACGCTTTT GGGGTTCGTC CCATTACGCC TATCAAGCCA CTCAAGTCAT GGTGAGCCGG CCTCGGCGGC CGCTTGCAGT GGGCAAGCTG CGTGTGGAAT TCGTTGTCAA GAAGGCCTTG GGCGACACCC CCGTGGTTCA CGAGCGGACC AAGATGGCGC GCATGCGCAT CAGCACTCGT GAAGCCACCG TGCTTGACCT CATTCGACAC CAAAACACCG TGGGCGGACT GGAGGCCGTC GCTCGGATTG CCCACGACCT CCTACCGAAG ATGACGTCGG TCGGCGTGCG CGACGCTGTA AGGGCCCTGA ACCAAGTGCC GGCCGTCCAG CGCTTCGGGT TCGTGCTCGA CCAGCTCGGA GGGGGGCGCT TGGCAGATAC GGTCGCCAGC TGGCTGCATC AGCAACGGCG CAGTGTGCAG CCGCTGGTCA CGCCCCGAGA TGACCAAGCC ACCATGCACC TGGTCGACGG CAAATGGGCC ATCGAGTACA CGTCGAACCA GCACGAACTA CTGAAGGAGA TGCGAGGATG A
|
Protein sequence | MAPTPPTQAF PVGQERSAEL LRNLQSQARY LFREDEFARH TGREPGGPAS QMALQRLSRA GRIVLAQKNA ARWLIVPPEQ AHYGAPPVDW WLDDLMRDQE PAYYLALLSA ARFWGSSHYA YQATQVMVSR PRRPLAVGKL RVEFVVKKAL GDTPVVHERT KMARMRISTR EATVLDLIRH QNTVGGLEAV ARIAHDLLPK MTSVGVRDAV RALNQVPAVQ RFGFVLDQLG GGRLADTVAS WLHQQRRSVQ PLVTPRDDQA TMHLVDGKWA IEYTSNQHEL LKEMRG
|
| |