| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4501 |
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| Symbol | |
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| ID | 7972790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4752157 |
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| End bp | 4753353 |
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| Gene Length | 1197 bp |
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| Protein Length | 398 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644795091 |
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| Product | putative transposase |
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| Protein accession | YP_002946378 |
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| Protein GI | 239817468 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCACT GCGCCCTGGA AGTCGCCGAC GTCTTCCGCA CCCACGGTCC CGGCTGGCGC
AACGCGCAGC GTGGTCACCT GAGCCTGGGT CAACTCAAGG TCATGTCGGC CATCGAGCAG
TGCCGCAGCG CGGCGCTGGG GGGCCACGTG TTGCGTTGCG AAGGCTGCGG GCAGGATCAG
ATCGCCTACA ACTCGTGCCG CAACCGGCAT TGCCCGAAGT GCCAGGCCAG TGCGGCGCAG
CGCTGGCTCC AGGCGCGCCA GGCCGATCTG CTGCCGGTGG ACTACTACCA CGTCGTCTTC
ACCTTGCCGG CGCCGATCAG TGCCATCGCC TACTGCAACA AGGCCGAGAT CTACGCCTTG
CTGTTCGACA CGGCCGCCCA GACCCTGTTG ACCATCGCAG CCGATCCCAA GCACCTTGGC
GCGAGCATCG GTGCGACCCT GGTGCTGCAC ACGTGGGGAT CGGCACTGAC GCACCACCCG
CATGTGCACG GTATCGTGCC GGGCGGAGGT CTGTCGCCGG ATGGCGGGCG CTGGGTCGCC
TGCAAGCCCG GCTTCTTCCT GTCCGTGCGG GTGCTGTCGC GCCTGTTCAG AAGGCGCTTC
CTCGAAGCGC TCGGACAGCT GCATCGCGCG GGGCGCCTGC GGTTCTTCGG CGAGTTCGCC
GCGCTGGCCG ACGCGAATGC CTTTGCGGCC TGGCTCGCGC CGCTGCGCAA GTGCGAATGG
GTCGTCTACG CCAAACGACC GTTCGCCGGA CCCGAAGCGG TGCTGGCCTA CTTGTCCCGC
TACACGCACC GCGTCGCCAT CTCCAACAGC CGGCTTGTTG CCATGGACGA ACAAGGCGTC
ACCTTCCGTC GGAAGGACTA TCGGGCCAAG GGGCGCACTC GGCGCAAGAC GATGACGCTC
GATGCCGATG AGTTCATGCG CCGCTTCCTG CTGCATGTTC TGCCGGGCGG CTTCCACCGC
ATCCGACACT ACGGGCTTCT GGCCAACGGC AACCGCACGG CCAACCTGGC GCGCATCCGC
GAACTGCTGG GGCAAGAGGC TGACGCGGTC ACGCAGATCG CGAGCCTGGA TGCCGAGCCT
TGCCATCCTC CACCGACCTT CGTCTGCATG CACTGCGGCG CTGCGATGAT CGTCTTGCTG
ACGTTGGCTC GCGGGCAGCC GATCCGTGCG CCGCCACCAC AGGTCCGGGC ACCATGA
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| Protein sequence | MAHCALEVAD VFRTHGPGWR NAQRGHLSLG QLKVMSAIEQ CRSAALGGHV LRCEGCGQDQ
IAYNSCRNRH CPKCQASAAQ RWLQARQADL LPVDYYHVVF TLPAPISAIA YCNKAEIYAL
LFDTAAQTLL TIAADPKHLG ASIGATLVLH TWGSALTHHP HVHGIVPGGG LSPDGGRWVA
CKPGFFLSVR VLSRLFRRRF LEALGQLHRA GRLRFFGEFA ALADANAFAA WLAPLRKCEW
VVYAKRPFAG PEAVLAYLSR YTHRVAISNS RLVAMDEQGV TFRRKDYRAK GRTRRKTMTL
DADEFMRRFL LHVLPGGFHR IRHYGLLANG NRTANLARIR ELLGQEADAV TQIASLDAEP
CHPPPTFVCM HCGAAMIVLL TLARGQPIRA PPPQVRAP
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