Gene Vapar_4428 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4428 
Symbol 
ID7974102 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp4670158 
End bp4670577 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content69% 
IMG OID644795017 
ProductOsmC family protein 
Protein accessionYP_002946305 
Protein GI239817395 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1764] Predicted redox protein, regulator of disulfide bond formation 
TIGRFAM ID[TIGR03561] peroxiredoxin, Ohr subfamily 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.49073 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCGCA TCGAAAAAGT TCTCTACACC GGCAAGACCC GCACCTCTTC GGGTGGCCGC 
GACGGCGAGG CGCGCAGCTC CGACGGCCGC CTGGACATCA AGCTCTCGTC GCCCGGCAGC 
GCCGGCAGCG GCACCAACCC GGAGCAGCTG TTCGCGGCCG GCTGGTCGGC CTGCTTCATC 
GGCGCCATGG GCAAGGCGGC GGGCAGGATG AAGGTCGCAT TGCCGCCCGA CCTGGCCGTC 
GATGCCGAAG TCGACCTGGG CACGGCGGGC AGCGAATACT TCCTGCAGGC GCGGCTGAAT 
GTGAGCCTGC CGGGCCTGGA CCGCGAAGTG GCGCAGGCCC TGACGGACGC GGCGCACCAG 
ACCTGCCCCT ATTCCAAGGC CACCCGCGGC AATATCGACG TTTCCATCCA CCTGGTGTGA
 
Protein sequence
MTRIEKVLYT GKTRTSSGGR DGEARSSDGR LDIKLSSPGS AGSGTNPEQL FAAGWSACFI 
GAMGKAAGRM KVALPPDLAV DAEVDLGTAG SEYFLQARLN VSLPGLDREV AQALTDAAHQ 
TCPYSKATRG NIDVSIHLV