Gene Vapar_4397 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4397 
Symbol 
ID7974071 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp4639438 
End bp4639908 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content67% 
IMG OID644794986 
ProductEnoyl-CoA hydratase 
Protein accessionYP_002946274 
Protein GI239817364 
COG category[I] Lipid transport and metabolism 
COG ID[COG2030] Acyl dehydratase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.124915 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCGCA TGACCAAAAA GACATTCCAG ACGCTCCAGG ATCTTGCGGC CTGCGTCGGC 
CAGGAAGTTG CCGTGAGCGA CTGGATCACC ATCACGCAAG AGCAGGTGAA CCAGTTCGCC
GAGGCCACGG GCGACCACCA GTGGATCCAT GTCGACATCG AGCGCGCCAA GGCCGGGCCC
TTCGGCGGGC CGATCGCCCA TGGCTTCCTC ACGCTGTCGC TGCTGCCGCG CTTCTTCGAG
GCGGCGCTCG ATGTGGTCGA GTCGCGCATG GGCGTGAACT ACGGGCTGAA CCGGGTGCGC
TTCATGTCGC CGGTGCCGGT GGGCAAGCGG CTGCGCGCGC GCATGAAGCT GCTCACGGCG
GAGCCGATCG CCGACGACGG CATCCAGATG ACCTGGGAAG CCACGATCGA GCTCGAAGGC
GCGGCCAAGC CGGCCTGCGT GGCCGAATCG GTGGTGCGCC GCTACCGCTG A
 
Protein sequence
MPRMTKKTFQ TLQDLAACVG QEVAVSDWIT ITQEQVNQFA EATGDHQWIH VDIERAKAGP 
FGGPIAHGFL TLSLLPRFFE AALDVVESRM GVNYGLNRVR FMSPVPVGKR LRARMKLLTA
EPIADDGIQM TWEATIELEG AAKPACVAES VVRRYR