| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4372 |
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| Symbol | |
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| ID | 7974046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4616734 |
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| End bp | 4618080 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644794961 |
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| Product | peptidase M16 domain protein |
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| Protein accession | YP_002946249 |
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| Protein GI | 239817339 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCCCA TGACAAAAAT CCTGCGCTCC GCGCTGTTCG CGGCCGCCAC GGCCTTCGCC
GGCCTGAACG CCGCACAGGC CGCGCTGCCG ATCGAGCACT GGACGCTCGC GAGCGGCGCC
AAGATCTACC TGGTGTCGAC CCAGGCGCTG CCTATCGTCG ACGTGCAGAT CGATTTCGAT
GCCGGCAGCC GGCGCGATCC GGCCGGCCAA GCCGGCCTGG CCAGCGCGAC CGCGACCATG
GTCGAGAAGG GCGTGCGCGC CGGCAAGAAC GGCGAGCCGG CGCTCGACGA GAACGCGCTC
GGCGAGGCCT GGGCCGACCT GGGCGCCGAG TTCGGCACCA GCGCCGGCAC CGACCGCGCC
AGCTACTCGC TGCGCACCTT GTCCGACCCG GCGCTGCGCG CCAAGGTGGT GGCGCTGGCC
TCGCGCGAGA TCGGCGAGCC GGCCTTTCCC GACGACATCT GGCAGCGCGA GCGGGAGCGC
ATCAATGCCT CGCTGAAGGA AGCCAACACC AAGCCGGCAA CCATCGCAGG CCGCGCCTTC
GCGAAGGCCG TCTACGGCGG CCATCCCTAC GGCCAGGAAG TCACCGAGGC CACGCTCGCG
CGCATCGACA CCGCCGCCAT GCGGCAGCGC TACCAGGAGC TGATCGCGCC GTGCCGGGCC
AAGCTCAGCA TCGTGGGCGC CGTGACCCGC GCCGAGGCCG AGGCCATGGC CACCGCGCTG
CTCTCCCGGC TGCCGGGGCC CGAGGCGTGC ACGCCGCTCC CGGCGATTGC GCCGGTGGCC
GCGCTCGCCG CGCCCAAGGA CGAGCGCATT CCCTTCGCTT CGGCCCAGGC CCACGTGCTG
ATCGGCCAGC CCGGCTATCC GCGCAAGGAC CCGGACCATT TCGCGCTCAC GCTCGGCAAC
TACGTGCTGG GCGGCGGCGG TTTTGTCTCG CGGCTGACCA ACGAAGTGCG CGAGAAGCGC
GGCCTGGCCT ACAGCGTCTA CAGCGGCTTC GCGCCGGGGC TGGACGCCGG CGCCTTCCGC
GTCGGCTTCC AGACGCGCCC CGACCAGGCC GAAGAGGCGG TGAAGGTCTC ACGCGACGTG
CTCGCCAGGT TCGTGGCCGA AGGCCCCACC GCCGCCGAGC TCAAGGCCGC CAAGGACAAC
CTGATCGGCG GCTTCCCGCT GCTGCTGGAC AGCAACCGCA AGCTCATCGG CAACGTGGCC
AACATCGCCT GGCACGACCT GCCACTCGAC TATCTCGACA CCTGGACCGC GCGCATGGAC
GCGGTCACGG CGGCCGAGGT CCGGGCCGCC TTCGCGCGCA AGCTGCAGCC CGAACGCATG
GTGACGGTGG TGGTGGGCGG AAAATAG
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| Protein sequence | MTPMTKILRS ALFAAATAFA GLNAAQAALP IEHWTLASGA KIYLVSTQAL PIVDVQIDFD
AGSRRDPAGQ AGLASATATM VEKGVRAGKN GEPALDENAL GEAWADLGAE FGTSAGTDRA
SYSLRTLSDP ALRAKVVALA SREIGEPAFP DDIWQRERER INASLKEANT KPATIAGRAF
AKAVYGGHPY GQEVTEATLA RIDTAAMRQR YQELIAPCRA KLSIVGAVTR AEAEAMATAL
LSRLPGPEAC TPLPAIAPVA ALAAPKDERI PFASAQAHVL IGQPGYPRKD PDHFALTLGN
YVLGGGGFVS RLTNEVREKR GLAYSVYSGF APGLDAGAFR VGFQTRPDQA EEAVKVSRDV
LARFVAEGPT AAELKAAKDN LIGGFPLLLD SNRKLIGNVA NIAWHDLPLD YLDTWTARMD
AVTAAEVRAA FARKLQPERM VTVVVGGK
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