Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_4328 |
Symbol | |
ID | 7970516 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 4573042 |
End bp | 4573956 |
Gene Length | 915 bp |
Protein Length | 304 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644794914 |
Product | hypothetical protein |
Protein accession | YP_002946205 |
Protein GI | 239817295 |
COG category | [S] Function unknown |
COG ID | [COG1561] Uncharacterized stress-induced protein |
TIGRFAM ID | [TIGR00255] conserved hypothetical protein TIGR00255 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAGTTT ACAGCATGAC CGGCTATGCC AGTGGCCAGA ACGGCCCCGC CGGCAGCCAC TCCGAAGCCG AGGCACGGCC TGCCGCCGCG GGCCGTCTCG GGGTCGAAAT CCGCTCGGTC AACAGCCGCT TCCTCGACCT CACCTTCAAG TTGCCGGAGG AACTGCGCCA GCATGAAACC GCGCTGCGCG AGTTGCTCAC GGGCAAGCTC AAGCGCGGCA AGGTGGAGGT GCGCGCCGCC ATCGAGAACA CCGCCCAGGC GGGCGTCGTC GAGCCCTCCG TCAAGCTGCT GCAGCGGCTC AACGGCGTGC AGGACGGCAT CAAGGCCTGG CTGCCCGGCG CCCGCGAACT GAGCGTGGCC GACGTGCTGC GCCTGGCCGG CGGCGACAGC GCCGCCCGCG GCGACTGGGG CGGCGACCTG CTCGAGGTGG CCGGCAAGGC GCTGGACGCG CTGATGTCGG CCCGCCAGCG CGAAGGCGCA CGGCTCGCCA AGATGCTGGA AGCCCACCTG GCCCAGCTGC GCGCGCTGGT CGAACAGGCC GGCCCGCTGA TTCCGCAGCT GGTCGAGCAG CAGCGCGCTC GTTTCCTGGA GCGCTGGCAG GAAGCCATGG GCATGACCGG CGGCACCCTG CCCGAGGCCG CCCAGGACCG CGCGCTGACC GAGGCCACCG CCTTTGCCAT CCGGATCGAC GTGGCGGAAG AGCTCACGCG GCTGAATTCG CACCTCGACG AGATCGAGCG GCTGCTCAAG AAGGGCGGCG AAATCGGCAA GCGGCTGGAC TTCCTGATCC AGGAGCTGCA TCGCGAGGCC AATACACTGG GCTCCAAGTC GGCCGCGCTG GAGCTCACCC GCATCGGCGT GGACATGAAG GTCCTGATCG AGCAGATGCG TGAACAGGTA CAGAACATCG AATGA
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Protein sequence | MPVYSMTGYA SGQNGPAGSH SEAEARPAAA GRLGVEIRSV NSRFLDLTFK LPEELRQHET ALRELLTGKL KRGKVEVRAA IENTAQAGVV EPSVKLLQRL NGVQDGIKAW LPGARELSVA DVLRLAGGDS AARGDWGGDL LEVAGKALDA LMSARQREGA RLAKMLEAHL AQLRALVEQA GPLIPQLVEQ QRARFLERWQ EAMGMTGGTL PEAAQDRALT EATAFAIRID VAEELTRLNS HLDEIERLLK KGGEIGKRLD FLIQELHREA NTLGSKSAAL ELTRIGVDMK VLIEQMREQV QNIE
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