| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_4198 |
|---|
| Symbol | |
|---|
| ID | 7971935 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Variovorax paradoxus S110 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012791 |
|---|
| Strand | - |
|---|
| Start bp | 4442285 |
|---|
| End bp | 4442701 |
|---|
| Gene Length | 417 bp |
|---|
| Protein Length | 138 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 644794784 |
|---|
| Product | flagellar basal-body rod protein FlgC |
|---|
| Protein accession | YP_002946077 |
|---|
| Protein GI | 239817167 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG1558] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR01395] flagellar basal-body rod protein FlgC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCGCATC CCGGTGCTTC CATGAACATC TTCAGCGTGG CGGGCTCCGC CATGGCCGCG
CAGTCGCAGC GCATGAACGT GACGGCCAGC AATCTTGCCA ACGCCGAGAG CGTGGCCGGC
CCCGACGGCA AGCCCTACCG CGCCAAGCAG GTGGTCTTCG AAGTGGACGC CTCGGGCCAG
CAGGACATCG GCGGCGTGAA GGTGGCCGGC GTCATCGAGG ACCCCTCGCC GCTGAAGATG
GTCTTCGACC CGAAGAACCC GCATGCCGAC GCCAAGGGCT ACGTGGCCAT GCCCAACGTC
AACGTGGTCG AGGAGATGAC CAACATGATT TCCGCCTCGC GCAGCTACCA GGCCAACGTC
GAGGTGCTCA ACACCGCCAA GACGCTGATG GTCAAGACGC TGAGCATCGG CCAGTAA
|
|---|
| Protein sequence | MPHPGASMNI FSVAGSAMAA QSQRMNVTAS NLANAESVAG PDGKPYRAKQ VVFEVDASGQ
QDIGGVKVAG VIEDPSPLKM VFDPKNPHAD AKGYVAMPNV NVVEEMTNMI SASRSYQANV
EVLNTAKTLM VKTLSIGQ
|
|---|
| |