Gene Vapar_4064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_4064 
Symbol 
ID7974386 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand- 
Start bp4307050 
End bp4307667 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content68% 
IMG OID644794651 
Productcytoplasmic chaperone TorD family protein 
Protein accessionYP_002945944 
Protein GI239817034 
COG category[R] General function prediction only 
COG ID[COG3381] Uncharacterized component of anaerobic dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.625607 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCCAGT TTCCTCCGAT GACCTCCGCC CTCGACGAGG AAATTGCGCG CGCCGAGGTC 
TACGGCCTGC TCGCGCGCCT CTGGTATGCG GCGCCCGATG CCGAGCTGCT CGGCGTCTTC 
GGTGTGGCGC CCACCGAGGC GCCCGCGGCC GGCGCCTTCC TCGAGGAGCC GTGGCGCCAG 
CTGGTCGGCG CAGCGCGCGG CACCGACGCG GCCGCGGTGC ATGCCGAGTA CGACGCGCTC 
TTCGGCGGTA TGGGCAAGCC CGAGATCTAC CTGTTCGGCT CGCACTACCT GAGCGGCTTT 
CTCAACGACA AGCCGCTGGC GATGCTGCGC ACCGACCTGG CCCGCCTGGG CCTCGCGCGC 
GGCGACGCCG TCTCCGAAAG CGAAGACCAT GTTGCCTGCC TGTTCGAGGT GATGCGCTAC 
CTTATTGCCG GTGACGACGC GGCGGTGGCC AACCTCGCGC AGCAACAGGC TTTTTTCGCC 
ACCCATCTGC AGCCGTGGCT GCCGACGCTC TGCGACGCAG TGGCCCAACA TCCGAAGGCG 
CATTTCTATG CGTCGCTAGC CGGCTTCACC CGGGCCTTCG CCGAGGTCGA GGTCCAGGGC 
TTCGACATGC TCGGTTAA
 
Protein sequence
MSQFPPMTSA LDEEIARAEV YGLLARLWYA APDAELLGVF GVAPTEAPAA GAFLEEPWRQ 
LVGAARGTDA AAVHAEYDAL FGGMGKPEIY LFGSHYLSGF LNDKPLAMLR TDLARLGLAR 
GDAVSESEDH VACLFEVMRY LIAGDDAAVA NLAQQQAFFA THLQPWLPTL CDAVAQHPKA 
HFYASLAGFT RAFAEVEVQG FDMLG