| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3995 |
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| Symbol | |
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| ID | 7974560 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4237165 |
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| End bp | 4238103 |
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| Gene Length | 939 bp |
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| Protein Length | 312 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794581 |
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| Product | Rhodanese domain protein |
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| Protein accession | YP_002945875 |
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| Protein GI | 239816965 |
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| COG category | [S] Function unknown |
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| COG ID | [COG0586] Uncharacterized membrane-associated protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.976253 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAGC TGATGTCGCT GCTGGTGCAG AACGCGATCG CGATCGTCTT CGCGGCGAGC
TTTGCCGCGC GCCTCGGATT GCCGGTGCCC GCGGCCGCGG TGCTGGTGGT GTCGGGGGCG
CTGCTGGCGG CCGGCAATGT CTCGGTGGCG GGCGTGGTGC TGGCTGCGGT GCTGGCCAAC
GTGCTGGGCG ATGGCGCGTG GTTCTATGCC GGGCGCCGCT TCGGCTACCG TTTCATGCGG
CTTCTGTGCC GCATCTCGCT GTCGCCCGAT TCATGCGTGC GGCGCGGCGA ATCGCTGATC
GGCCGGTGGG GCGGCCTCTC GCTGGTGGCC GCCAAGTTCG TGCCGGGCGT CTCGGTGGTC
GCGCCGCCGA TGGCCGGTGC GCTGGGCATG TCGGTGTGGC GCTTCATCGG CTTCGACATC
GGCGCCGCGC TGGTCTGGAC CGTCGTCTTC CTCGGGCTGG GCTGGGCCTT TCGCGACCAG
ATCCAGGAGG TGCTCGCGAT GCTGGCCCAG GCCGGCGGCA TCGCGACCGC GGCCCTGGTG
GTGGTGCTGG CCGTGATGCT GGCGGTGCGC TACTGGCGCC GGCGCGCCTT CATGCGGCTC
ACGGGCATGC CGCGCATCAG CGTGGACGAG CTGCACGAGC TGCTCGCGAG CGAGGCGCCG
CCGCTGGTGA TCGACGTGCG CGGGGAGGCC GGCGTGCAGG TCGATCCGCG CCGCATTCCC
GGGGCGCTGC CGTACACGCT CAAGGCGCTG CAGCAGCGGC ATCCGGAACT GCCGCTGGTC
GGCGGGCGCG ACGTGGTGCT TTACTGCAAC TGCCCCAACG AGGTGTCGGC CGCGCTGGCT
GCGCGCGTGC TGCTGGCGCG CGGTGCGCGG CGCGCACTGC CGCTCACGGG TGGGCTCGAT
GCCTGGGTGG CCTCGGGCCG GCCGACGAGC CTGCACTGA
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| Protein sequence | MAQLMSLLVQ NAIAIVFAAS FAARLGLPVP AAAVLVVSGA LLAAGNVSVA GVVLAAVLAN
VLGDGAWFYA GRRFGYRFMR LLCRISLSPD SCVRRGESLI GRWGGLSLVA AKFVPGVSVV
APPMAGALGM SVWRFIGFDI GAALVWTVVF LGLGWAFRDQ IQEVLAMLAQ AGGIATAALV
VVLAVMLAVR YWRRRAFMRL TGMPRISVDE LHELLASEAP PLVIDVRGEA GVQVDPRRIP
GALPYTLKAL QQRHPELPLV GGRDVVLYCN CPNEVSAALA ARVLLARGAR RALPLTGGLD
AWVASGRPTS LH
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