| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3961 |
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| Symbol | |
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| ID | 7970390 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4206333 |
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| End bp | 4207103 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644794547 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_002945841 |
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| Protein GI | 239816931 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0600] ABC-type nitrate/sulfonate/bicarbonate transport system, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGAACA CCAAGCAAAT CGAACGCTGG TCGCCCTGGC TGCTGCTCGT GGCCGTGATC
CTGCTGTGGC AGGTGATCTG CGCGGGCTTC GGCGTGTCGG ACTTCATCTT TCCGAGCCCG
CTGCGCATCT GGACCCAGTT CTGGGAGTTC AAGGAGATCA TCGCGGGCCA TGCGTGGCGC
ACCTTCTGGG TCACGATGGC GGGCTTCGGC CTGGCCATTG TGGTGGGCGT GCTGCTGGGC
TTCGTGATCG GCAGCTCGCG CATCGCGTAT GCGGCGATCT ATCCGCTCAT GACGGCCTTC
AACGCGCTGC CCAAGGCGGC CTTCGTGCCG ATCCTCGTGG TGTGGTTCGG CATTGGCGTC
GGCCCGGCGA TCCTCACGGC CTTCCTGATC AGCTTCTTCC CGATCATGGT CAACATCGCG
ACCGGCCTTG CCACGCTGGA GCCCGAGCTC GAGGACGTGC TGCGCGTGCT CGGCGCCAAG
CGCTGGGACG TGCTCATGAA GATCGGCCTG CCGCGCTCCA TGCCCTACTT CTTCGGCTCG
CTCAAGGTGG CGATCACGCT GGCCTTCGTC GGCACCACGG TGAGCGAAAT GACCGCGGCC
AACGAAGGCA TCGGCTACCT GCTCATTTCG GCCGGCTCGG CCATGCAGAT GGGCCTGGCC
TTCGCGGGCC TGATGGTGGT GGGCGCAATG GCCATGCTGA TGTACGAGCT CTTCAGCGTG
ATCGAGAAGC ACACGACCGG CTGGGCGCAT CGCGGCTCCC AAAACCAATA G
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| Protein sequence | MKNTKQIERW SPWLLLVAVI LLWQVICAGF GVSDFIFPSP LRIWTQFWEF KEIIAGHAWR
TFWVTMAGFG LAIVVGVLLG FVIGSSRIAY AAIYPLMTAF NALPKAAFVP ILVVWFGIGV
GPAILTAFLI SFFPIMVNIA TGLATLEPEL EDVLRVLGAK RWDVLMKIGL PRSMPYFFGS
LKVAITLAFV GTTVSEMTAA NEGIGYLLIS AGSAMQMGLA FAGLMVVGAM AMLMYELFSV
IEKHTTGWAH RGSQNQ
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