| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3882 |
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| Symbol | |
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| ID | 7969739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 4112071 |
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| End bp | 4113171 |
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| Gene Length | 1101 bp |
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| Protein Length | 366 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644794468 |
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| Product | basic membrane lipoprotein |
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| Protein accession | YP_002945762 |
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| Protein GI | 239816852 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1744] Uncharacterized ABC-type transport system, periplasmic component/surface lipoprotein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAAA ACCTCGCGGG CCGCGCCATT CTGGCGTGGG CAGCCGCTTG TTTTTTAACT
CCCGCCTTTT CGCAGCCGCA GTCTTCCAAG GAGCCGCTGA AGATCGGCTT CGTCTACGTC
ACGCCGGTCA CCGATGCCGG CTGGGTGCGC CAGCATGAAG AGGGCCGCAA GGCCGTCGAT
GCGGCGCTCG GCGGCAAGGT CAGCACCACC TTCGTCGAGA ACGTGCCCGA AGGCGCCGAC
GCCGAGCGCG TGATCCGCGA CCTCGCGCAG CAGGGCCACC GGCTGATCTT CACGCCCAGC
TTCGGCTACA TGGAGCCGAC GCTCAAGGTG GCGCGCGATT TTCCCGGCGT GAAGTTCGAG
TCGATCACCG GCTACAAGAC CGCGCCCAAC GTTGCCACCG CCAATGCGCG CTACTACGAA
GGCCGCTACC TCGCGGGCAT CGCGGCTGGC CGCATGACCA AGACGAACGT GGCCGGCTAC
GTGGCGGGCT TTCCCATTCC GGAGGTGCTG CAGGGCATCA ACGCCTTCAC GCTCGGCATG
CGCTCGGTGA ACCCGAATGC CAAGGTCGTC GTGGTGTGGC TCAACGAATG GTTCGATCCG
CCGAAGGAGC GCGACGCGGC CATGGCGCTG TTCAACCAGA ACGCCGACGT CATCGCCTTC
CACACCGGCT CCACGGCGGT GATGGCCGCG GCGCAGGAAC GCGGCAAGCT GGCCGTGGCC
TACCACTCCG ACATGCGCAA GATCGCGCCC GACGCGCAGA TCGTCGCCGT CACGCACCAG
TGGGGCGGCT ACTACACCGA GCGTGCGCGC GCGGTGCTCG ACGGCAGCTG GAAGAGCGGC
AATGTGTGGG GCGGCGTGAA GGAAGGAATG ATCCGCGTCG GCGACTTCGG CCGCAAGGTG
CCCAAGGCGG TGCAGCAGGA AGTGCTGGCG CGGCAGAAGG ACATTGCGGC GGGCAGGCTG
CAGCCCTTCC GCGCGGTGGC GGCCGATGTG CGCGACAACG AAGGCCGCAC CGTCATCGCC
AAGGGTGCGC AACTGAACGA CGAGCAGATC CTGAAGATGA ACTGGCTCGT GGAAGGCGTG
CAGGGGCGCG TGGGGCGTTG A
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| Protein sequence | MYKNLAGRAI LAWAAACFLT PAFSQPQSSK EPLKIGFVYV TPVTDAGWVR QHEEGRKAVD
AALGGKVSTT FVENVPEGAD AERVIRDLAQ QGHRLIFTPS FGYMEPTLKV ARDFPGVKFE
SITGYKTAPN VATANARYYE GRYLAGIAAG RMTKTNVAGY VAGFPIPEVL QGINAFTLGM
RSVNPNAKVV VVWLNEWFDP PKERDAAMAL FNQNADVIAF HTGSTAVMAA AQERGKLAVA
YHSDMRKIAP DAQIVAVTHQ WGGYYTERAR AVLDGSWKSG NVWGGVKEGM IRVGDFGRKV
PKAVQQEVLA RQKDIAAGRL QPFRAVAADV RDNEGRTVIA KGAQLNDEQI LKMNWLVEGV
QGRVGR
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