| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3842 |
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| Symbol | |
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| ID | 7969699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 4063848 |
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| End bp | 4065158 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794428 |
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| Product | Gluconate 2-dehydrogenase (acceptor) |
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| Protein accession | YP_002945722 |
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| Protein GI | 239816812 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGCGGC TGTTCAACCT GCTGGTGGCG GTGTTCGTCG TGGGCGCGGC GCTGTATTTC
TTCCTGAACC GCAGCGACAA GTCCGAGGGC GAGGCGCCGG TGCTGGCCGG CGCGCCCGCC
AATGCGGCGC TGCTCGTGCG CGGCGAATAC CTCACCAAGG CGGCCGACTG CATCGCATGC
CACACCGTGC CCGGCGGCAA GGGACAGCCC TTCGCGGGCG GCCTGCCCTT CGTGCTGCCT
TTCGGCACGA TCTACTCGTC GAACATCACC GCGGACCCGG AAACGGGCAT CGGCAAATGG
AGCGACGACG ACTTCGTGCG CGCGCTGCAC GACGGCGTGC GCGCGGACGG AAAACGCCTG
TACCCGGCGT TCCCGTACAC CTCGTACACC GCGCTGAGCC GCAATGACGT GCTCGCGATC
AAGGCCTACC TGTTCAGCCT GCCCAAGGTG AGCCAGCCGA ACCGGGAGGC CGACCTGGGC
TTTCCGTTCA ACCAGCGCTG GGCGATGGGC TTGTGGAACG CGGCCTTCTT CAAGAGCAGC
CGCTTCGAGG CCGATGCATC GAAGCCGCCC GCGTGGAACC AGGGCAAGTA CCTTGCCACG
GCGCTCGGCC ACTGCGCGGA ATGCCACACG CCGCGCAACT TCGCCTTCGC GATGGATGCG
GACAACAACC TCGCGGGCGA ATCGATCCAG GGCTGGCGCG CCTACAACAT CACGTCGGAC
GCGAAGCACG GCATCGGCGC CTGGAGCGAT GCCGAGGTTG CCTCGTACCT GACGACCGGC
CACGCGGCGG GCCGCGGCTC GGCCTCGGGG CCGATGGGCG AGGCGGTGGA GCACAGCCTG
CAGTACCTGA AGCCGGAGGA CGCCTCGGCG CTCGTGAGCT ACCTGCGCAC GGTGCCCGCG
AAGGCCGGCA AGAACCCGAT CGAAGTCGAT GCGAAGGCGC CATGGGCCGT GGCCGCGAGC
GCGGCAGCGC CCGCCACCAG CACGGCCGAA GGCCACGAGC AGGGGCTGCG GCTCTTCGCC
GCGGCGTGCG CGAGCTGCCA CCAGTGGAAC GGACAAGGCC AGCAGAGCGC CAACGCGTCG
CTGCTGGGGA CGCGCGGCGT GAACGACCCG GACGGCTCCA ACGTCACGCA GATGATCCTG
CAGGGCGTGA AGATGCGCGT GCGCGACCAG GAGGTCTACA TGCCGGCGTT CGGCAAGGCC
TACACGGACA CCGAGGTCGC GGCGCTCGCC AACTACGTCA TCGCGCAATT CGGGAACAAG
CAGGGCGCAG CGGTGACCCC GGAGTTCGTG GCGAAGCAGC GCACGCGCTA G
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| Protein sequence | MKRLFNLLVA VFVVGAALYF FLNRSDKSEG EAPVLAGAPA NAALLVRGEY LTKAADCIAC
HTVPGGKGQP FAGGLPFVLP FGTIYSSNIT ADPETGIGKW SDDDFVRALH DGVRADGKRL
YPAFPYTSYT ALSRNDVLAI KAYLFSLPKV SQPNREADLG FPFNQRWAMG LWNAAFFKSS
RFEADASKPP AWNQGKYLAT ALGHCAECHT PRNFAFAMDA DNNLAGESIQ GWRAYNITSD
AKHGIGAWSD AEVASYLTTG HAAGRGSASG PMGEAVEHSL QYLKPEDASA LVSYLRTVPA
KAGKNPIEVD AKAPWAVAAS AAAPATSTAE GHEQGLRLFA AACASCHQWN GQGQQSANAS
LLGTRGVNDP DGSNVTQMIL QGVKMRVRDQ EVYMPAFGKA YTDTEVAALA NYVIAQFGNK
QGAAVTPEFV AKQRTR
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