Gene Vapar_3702 details

Gene Information

• Locus tag: Vapar_3702
• ID: 7973935
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 3902466
• End bp: 3903146
• Gene Length: 681 bp
• Protein Length: 226 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 644794286
• Product: Glutathione S-transferase domain protein
• Protein accession: YP_002945584
• Protein GI: 239816674
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0625] Glutathione S-transferase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGTCCAACA AGCCCCTCAC CCTCGTCAGC CACCTGCTGT GCCCCTATGT GCAGCGCGCC 
GCCATCGCAC TGGCCGAAAA GAACGTGCCC TTCGAGCGCG TGGTGATCGA CCTGGCGAAC 
AAGCCGGACT GGTTCATTGC CATCTCGCCC CTGGGCAAGG TGCCGCTGCT GCGGCTTCAG 
CGCCCCGACG GCAGCGAAGC AGTGCTGTTC GAGAGCAATG TGATCTGCGA GTACCTCGAA 
GAAACCCAGC CCGGCCCGCG CCTGCATCCC GAAGATCCGC TCACCCGCGC CGAGCATCGC 
GCATGGATGG AGTTCGGCTC GGCCATCCTG GGCGACCTGT GGGGCTACGA GACCACGCGC 
GACGCCGAAG TGTTCGAGCA GAAGCGCCTG GCCCTTGCCG CCAAGTTCGA GCGCGTCGAA 
GCCGCGCTGG GCGCCGGCCC CTACTTTGCA GGCAAGAACT TCAGCCTGGT CGACGCGGTG 
TTCGCGCCGA TCTTTCGCTA CTTCGAGGTG TTCGATGAGA TCAGCAACTC GCACATCTTC 
GATGCCCTGC CCAAGGTGAA TGCGTGGCGC AAGGCACTGG CGGCGCGGCC GAGCGTGCAG 
AGCGCGGTGG TGCCGGAGTA TCCGCAGCAC CTGCGCGAAT TCCTGCGCAA GCACGAGGCG 
CACTTGCTCG CGCTCGCCTA G 

 

Protein sequence

MSNKPLTLVS HLLCPYVQRA AIALAEKNVP FERVVIDLAN KPDWFIAISP LGKVPLLRLQ 
RPDGSEAVLF ESNVICEYLE ETQPGPRLHP EDPLTRAEHR AWMEFGSAIL GDLWGYETTR 
DAEVFEQKRL ALAAKFERVE AALGAGPYFA GKNFSLVDAV FAPIFRYFEV FDEISNSHIF 
DALPKVNAWR KALAARPSVQ SAVVPEYPQH LREFLRKHEA HLLALA