Gene Vapar_3698 details

Gene Information

• Locus tag: Vapar_3698
• ID: 7973931
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Variovorax paradoxus S110
• Kingdom: Bacteria
• Replicon accession: NC_012791
• Strand: +
• Start bp: 3898107
• End bp: 3898802
• Gene Length: 696 bp
• Protein Length: 231 aa
• Translation table: 11
• GC content: 70%
• IMG OID: 644794282
• Product: nitroreductase
• Protein accession: YP_002945580
• Protein GI: 239816670
• COG category: [C] Energy production and conversion
• COG ID: [COG0778] Nitroreductase

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCCTCCC CCATCCCCTG CGACCCCACG CTCGCGCCGG CCTTCGAGGC CCTGCTCGCA 
GAGCGCTACA GCTGCCGCGG CTACCTGGCC GAGCCCGTCG CGCGCGAGAC GATCGATGCC 
ATCCTCCGGC TGGCGCAGCG CACCGCCTCG TGGTGCAACT CGCAGCCCTG GCAGGTGATC 
GTGGCCAGTG CCGCGGCCAC CGAACGGCTG CGCCAGGCCT TCGATTCGGA CGAAGCCGCG 
GCCGATGCCG CATTCGACAT TGCACCGCCC GCGGAATACC GCGGCGTGTA CCGCGAGCGC 
CGCCGCGAAT GCGGCTTCCA GCTGTATGAA AGCGTGGGCG TGGCGCGCGG CGACCGCGAG 
GCCTCGCAAC GGCAGGCGCA GGAGAACTTC AGGTTCTTTG GCGCCCCGCA TGTGGCGCTC 
GTCACCACCG AGGCGCTGCT CGGCACCTAT GGCGCGCTCG ACTGCGGCGC CTATGTCAAC 
AACTTCATGC TGGCGGCGCG CAGCCTGGGC GTGGCCAGCA TCGCGCAGGC GGCCGTGGCC 
TCGCGCTCGA AGTTCCTGCA TCGCTGGTTC GATATTCCGG ACGATCGCCA GGTGGTCTGC 
GGCATCGCCT TCGGCTACGA GGACCCCTCG CACCCGGCCA ACCGGTTCCG CACGTCGCGG 
GCGCCGCTGG CCCAGGTTTG CCAATGGGTG GATTAG 

 

Protein sequence

MPSPIPCDPT LAPAFEALLA ERYSCRGYLA EPVARETIDA ILRLAQRTAS WCNSQPWQVI 
VASAAATERL RQAFDSDEAA ADAAFDIAPP AEYRGVYRER RRECGFQLYE SVGVARGDRE 
ASQRQAQENF RFFGAPHVAL VTTEALLGTY GALDCGAYVN NFMLAARSLG VASIAQAAVA 
SRSKFLHRWF DIPDDRQVVC GIAFGYEDPS HPANRFRTSR APLAQVCQWV D