| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3622 |
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| Symbol | |
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| ID | 7970697 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3831892 |
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| End bp | 3832797 |
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| Gene Length | 906 bp |
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| Protein Length | 301 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644794207 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_002945505 |
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| Protein GI | 239816595 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG3279] Response regulator of the LytR/AlgR family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAGATT CCCGGAAGAA CCTGTACGAG CGCTACGAAC CCATCCGCCG CCGCGTGGAA
GTGGGCTTCT GGATCGTCTT CATGGCGCTG CAGGCGGTGT TCAACACCAC CGTCGCGCTG
GTCGACGCGC GCGACCGCGC CGTGCCGCGC GCCGCCTGGG AAATCGTCAC CTGGGAGGTG
TCGAGCCACC TCGTGCTGCT GGCGCTGGTG CCGGCGGTGG TGGCCATCCA GCACCGGCTG
TCGCCGCTCG CACGCACCCA CCTGCTGCGC TACCTGGGCT GGCACCTGGC CGCCAGCGTG
GTCTTCAGCG TGGTGCACGT GGCGGCGATG TTCGCGCTGC GCGCGATGGT CTACGCGGCG
GTTGGCGAGC GCTACGACTT CGCGGGCTGG ACCGGGCGCT GGGGCTACGA ATACCTGAAG
GACGTGCGCG CCTACCTGTC TATGGTGTTC GGCATCTGGG TGTACGGCGT GTTCATGCTG
CGGCTGCAGG GCGAGGCGCG CGTGCTCGAC CCGCCCGAGG CGGCGGCGGC AGCGCCGGCC
GAGCCCGCCG AAGCCCATCG GGCTGCCGCG CCGCCCGCGC GCCCCGAGCG CTTCCTGGTG
CGCAAGCTGC GGCGCGAGTT CCTCATTGCC GCGAGCGACA TCGACTGGCT CCAGGCCGAA
GGCAACTACG TCGGCCTGCA CGTCAACGGC CACGACTACC TGCTGCGCGC CACGCTCACC
GATTTTCTGG CGCAGCTCGA CCCCGCCCAT TTCGTGCGCG TGCACCGAAG CCACGCCGTC
AACCTCGGCC GCATCAAGGA AATCGAGCCG CTCGACGGCG GCGATGCCCG GCTGCACATG
CACGACGGCA GCACGGTGCC CTGCAGCCGG CGCTATCGCG AGGCCTTGCG CGCCGGGGCA
AGCTGA
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| Protein sequence | MADSRKNLYE RYEPIRRRVE VGFWIVFMAL QAVFNTTVAL VDARDRAVPR AAWEIVTWEV
SSHLVLLALV PAVVAIQHRL SPLARTHLLR YLGWHLAASV VFSVVHVAAM FALRAMVYAA
VGERYDFAGW TGRWGYEYLK DVRAYLSMVF GIWVYGVFML RLQGEARVLD PPEAAAAAPA
EPAEAHRAAA PPARPERFLV RKLRREFLIA ASDIDWLQAE GNYVGLHVNG HDYLLRATLT
DFLAQLDPAH FVRVHRSHAV NLGRIKEIEP LDGGDARLHM HDGSTVPCSR RYREALRAGA
S
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