Gene Vapar_3618 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_3618 
Symbol 
ID7970693 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp3828021 
End bp3828311 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content62% 
IMG OID644794203 
ProductDNA polymerase beta domain protein region 
Protein accessionYP_002945501 
Protein GI239816591 
COG category[R] General function prediction only 
COG ID[COG1669] Predicted nucleotidyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGTCCTT CTGAAGCCCT GTCACAGCAC CGCGTCCGCA TCCGCGAGAT CGCACTGCGT 
CATCACGTCA GCAGCGTGAG AGTGTTCGGC TCGGCTTCGC GTGGAGAAGA CGGACCCGAC
AGCGATCTCG ATCTGCTGGT CGAACCTACG GAACAGACCA CTCTCATGGA CATCGGCGCC
ATCAGGCACG AGTTGAAGGC CCTTCTTGGC ATGGAAGTCG ACGTGCTCAC GCCCAACGGC
TTGCCGCCGA AGTTCCGTGA TCAGGTGCTG CGCGAGGCGG TGCCAGTATG A
 
Protein sequence
MRPSEALSQH RVRIREIALR HHVSSVRVFG SASRGEDGPD SDLDLLVEPT EQTTLMDIGA 
IRHELKALLG MEVDVLTPNG LPPKFRDQVL REAVPV