| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3547 |
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| Symbol | |
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| ID | 7972173 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3740705 |
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| End bp | 3741175 |
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| Gene Length | 471 bp |
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| Protein Length | 156 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644794132 |
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| Product | cupin region |
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| Protein accession | YP_002945430 |
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| Protein GI | 239816520 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0815516 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACACGCC AGCCATTTGC CGCCTGGGCG ATCGGCGCCG CCCTGATCGC GGGCATCGCC
ACCAGCTGGG CCCAGTCCGG CGATCACCGG ATGGTCTCGC CCGCCGACCT CAAATGGGCC
GATGTTCCCT CGCTGCCGCC CGGCGCGAAG CTCGCGGTGA TCGAAGGCCC GATGAGCGAG
GCCGTGCCTT TCACGGTGCG CCTCAAGGTG CCGGCCAATT ACCGGATTCC GTCGCACTGG
CATCCGGCCG TCGAGCGGGT GACCGTGCTC TCGGGCACCT TCCACATGGG CCTGGGCGAC
AAGCTCGACA TGCAGAAGTC GATGCCGGTG GTTGCGGGCG GCATGATGAT CCTGCAGCCC
AAGACGCCGC ACTTCGCCTG GACCAGCGAG GAAACGGTGG TGCAACTGCA CGGCACCGGC
CCCTGGGGCG TGACCTACGT CAATCCGGCG GACGACCCGC GGGCGAAATG A
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| Protein sequence | MTRQPFAAWA IGAALIAGIA TSWAQSGDHR MVSPADLKWA DVPSLPPGAK LAVIEGPMSE
AVPFTVRLKV PANYRIPSHW HPAVERVTVL SGTFHMGLGD KLDMQKSMPV VAGGMMILQP
KTPHFAWTSE ETVVQLHGTG PWGVTYVNPA DDPRAK
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