| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3525 |
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| Symbol | |
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| ID | 7972151 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3716425 |
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| End bp | 3717726 |
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| Gene Length | 1302 bp |
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| Protein Length | 433 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794110 |
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| Product | ANTAR domain protein with unknown sensor |
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| Protein accession | YP_002945408 |
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| Protein GI | 239816498 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3707] Response regulator with putative antiterminator output domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTTCCC TTCTCGCCGT CCTGCCCAAT GAATTCGCCG GCTCCGCGCC GTTGCCGGAG
CTGCCGGAGC CGTTGCGGCT GGCGCTCGAG GGGGCGAATG CCACCGTGCT CGGAAGGGCC
ACCTGCCACA CGCTGGTGCA GCAGGCGAGT GCGCTTGCAC CGCAACAGGC CCTGGTTCAT
CTGCCGGAGC CGGCGGATCA GCTGCCGGCG CTGGTCGATG CATTGCGGGC CTGGGGTGGT
GCGCCGCCTT GCGCGCTGAG CCTGGCCAGC GCGCCGCTGA GCGGAGAACA GCACGAGGCG
CTGGCCGCGC TCGGCGTGCA TGCGTGGGCG CCCATCGATG CGCTGGACGC CGTGTCGCTC
GCGGCACTGC TCGCCCGCGC GCAGGCCCGC TGGCAGCGCG AGGCCGCGCT GCGCACCGAG
CTCGACGCGC TGCGCACGCG CATGGACGAG CGCAAGTGGG TCGATCGCGC CAAGGGCCTG
CTGATGTCGG CGCGCGGCAT CGGCGAAGAC GAAGCCTTCG GCCTGCTGCG CGGTGCCGCG
ATGCATGCCA ACCTGCGGCT GGGCGAGGTG TCGCGCTCGG TCATCGAGGC CGCGCAGTGG
GCCGATGCGA TCAACCGCGC CGGGCAGCTG CGCATGCTCT CGCAGCGGCT GGTGCGCGTG
GCGGCGCAGC TGCTGTCGGG CATCGACGTG CAGCGCGCGC GGGTCCTGCG CACGCAGTCG
ACCGAGCGGG TGCAGCAGAA CCTCGATCAT CTGGGCACCC TCGAGCTGGG CGCGGCCGGC
GTGCTCGCGC TGGGCGAAGT GCAGGCCGCC TGGAGCGCGC TCGCCACCTC GCTGGCCGCG
CGTCCCGCGC AGCAGGGGCT GGCCGAGATC GATGCGCGCG GCGAGGCCTT GCTGTCGGCG
GCCGAGGCCA TGACCGAAGC GCTGGAGGCC TCGGGCGCGC GGCGCGCGCT GCGCATCGTC
AACATCTGCG GTCGCCAGCG CATGCGCGCG CAGCGCCTCG CGAAGGATGC ATTGCTCGCA
TCGATCATTG CGGCCGAGGC GTCGCGCGAG CGGCTGCTGC CGACCATGAA CGAGTTCGAG
GCCGCGCTGC TGGAGCTGGA GCGCGCGCCC CTCAGCTCAC CCGAGATCCG CGCCGCGCTG
GCGGCCGCGC GCGACGAATG GCTGCGCCTG GTCGGCGGCG TGCAGGCGCT GGACAGCCCC
GAAGGCCGCG CGACGCTGGT GCGTTCCAGC GAGGCGCTCG TCGACACCTT CGAGCGCCTC
ACCGCCTGGT ACGAGCACAG CCTGCAAGTC ATCATGTCCT GA
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| Protein sequence | MISLLAVLPN EFAGSAPLPE LPEPLRLALE GANATVLGRA TCHTLVQQAS ALAPQQALVH
LPEPADQLPA LVDALRAWGG APPCALSLAS APLSGEQHEA LAALGVHAWA PIDALDAVSL
AALLARAQAR WQREAALRTE LDALRTRMDE RKWVDRAKGL LMSARGIGED EAFGLLRGAA
MHANLRLGEV SRSVIEAAQW ADAINRAGQL RMLSQRLVRV AAQLLSGIDV QRARVLRTQS
TERVQQNLDH LGTLELGAAG VLALGEVQAA WSALATSLAA RPAQQGLAEI DARGEALLSA
AEAMTEALEA SGARRALRIV NICGRQRMRA QRLAKDALLA SIIAAEASRE RLLPTMNEFE
AALLELERAP LSSPEIRAAL AAARDEWLRL VGGVQALDSP EGRATLVRSS EALVDTFERL
TAWYEHSLQV IMS
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