Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3518 |
Symbol | |
ID | 7972144 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 3709386 |
End bp | 3709757 |
Gene Length | 372 bp |
Protein Length | 123 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644794103 |
Product | heat shock protein Hsp20 |
Protein accession | YP_002945401 |
Protein GI | 239816491 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0071] Molecular chaperone (small heat shock protein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTTCG CACCCACCCT TCGCACCGCC CGCTTTGCAC CCCGTTCGTA CGACCGCGCC TTCGAGCGCT TCGTCAACGA GGCCTTCGCC GGCACGCGCC CCTCGCCGCT CGTCGAGCAG GACGACAAGA GCTGGACGCT TTCCGTCGAC GTGCCGGGCC TCTCGCGCGA AGACCTCGCC ATCGGCATCG AAGGCGCCGT GGTCCGCATC GACAGCAAGG CAGAAGCCAA GCGCCAGTTC AAGGCAGCCT ACGAATTGCC GCTGGACATC GACGTGTCCT CGAGCGAAGC CAAGCTCGAG AACGGCGTGC TCACGCTGAA GCTGGGCAAG CTGGTGCCGG TGAGCCAGGT TTCGCAGCTG CAGATCAACT GA
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Protein sequence | MFFAPTLRTA RFAPRSYDRA FERFVNEAFA GTRPSPLVEQ DDKSWTLSVD VPGLSREDLA IGIEGAVVRI DSKAEAKRQF KAAYELPLDI DVSSSEAKLE NGVLTLKLGK LVPVSQVSQL QIN
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