| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3499 |
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| Symbol | |
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| ID | 7972124 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3689697 |
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| End bp | 3691727 |
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| Gene Length | 2031 bp |
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| Protein Length | 676 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644794083 |
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| Product | proton-translocating NADH-quinone oxidoreductase, chain L |
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| Protein accession | YP_002945382 |
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| Protein GI | 239816472 |
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| COG category | [C] Energy production and conversion
[P] Inorganic ion transport and metabolism |
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| COG ID | [COG1009] NADH:ubiquinone oxidoreductase subunit 5 (chain L)/Multisubunit Na+/H+ antiporter, MnhA subunit |
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| TIGRFAM ID | [TIGR01974] proton-translocating NADH-quinone oxidoreductase, chain L |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGCAA CCCTTTCCGC ATCCACCCTG CTGGCCGTTC CGCTGGCACC CCTGGTCGGC
GCCGTCGTCG CCGGCCTGTT CGGCACCCAA TTCGGCGGCA ATCACATCGG CCGCAAGGTC
ACGCATTCGC TGACCATCCT CGGCGTGCTG GTCGCCTTCA TCATCTCGGC CATGACGCTC
AAGAGCGTGG TGGCCGACGG CGCCCGCTTC AACGCCACCA TCTATGAATG GATGATGGTG
GGCGGCCTGA AGATGGAAGT CGGCTTCCTG GTCGACGGCC TCACGGCCAT GATGATGTGC
GTGGTGACCT TCGTCTCGCT GATGGTGCAC GTCTACACCA TCGGCTACAT GGAAGAAGAC
GAGGGCTACA ACCGCTTCTT CGCCTACATC TCGCTGTTCA CCTTCTCGAT GCTGATGCTC
GTCATGAGCA ACAACATGCT CCAGCTGTTC TTCGGCTGGG AGGCGGTGGG CCTGGTGTCG
TACCTGCTGA TCGGCTTCTG GTTCAACAAG CCGACCGCGA TCTTCGCGAA CATGAAGGCC
TTCCTGGTCA ACCGCGTGGG CGACTTCGGC TTCATCCTGG GCATCGGCCT GATCGCCGCC
TACGCCGGCA CGCTGAACTA CGGCGAAGCC TTCGCCAAGG CCAACACGCT GGCCGGCATC
ACCTTCCCCG GCACCGAGTG GATGCTGGTG ACCGTGATCT GCATCTGCCT GTTCATCGGC
GCCATGGGCA AGAGCGCGCA GTTCCCGCTG CACGTGTGGC TGCCCGACTC GATGGAAGGC
CCGACGCCCA TCTCCGCGCT GATCCACGCC GCAACCATGG TGACGGCCGG CATCTTCATG
GTGGCGCGCA TGTCGCCGCT GTTCGAACTC AGCGACACGG CCCTGAGCTT CATCCTGGTG
ATCGGTGCCA TCACGGCGCT GTTCATGGGT TTCCTCGGCA TCATCCAGAA CGACATCAAG
CGCGTGGTCG CGTACTCGAC GCTCTCGCAG CTGGGCTACA TGACGGTGGC GCTCGGTGCC
TCGGCCTACT CGGTCGCGGT ATTCCACCTG ATGACGCATG CCTTCTTCAA GGCGCTGCTG
TTCCTGGGCG CGGGCTCGGT GATCATCGGC ATGCACCACA ACCAGGACAT CCGCTGGATG
GGCGGCGTGC GCAAGTACAT GCCGATCACC TGGATCACCT CGCTCCTGGG TTCGCTCGCG
CTGATCGGCA CGCCGTTCTT CGCCGGCTTC TACTCGAAGG ACAGCATCAT CGAAGCGGTG
CACGAAAGCC ACCTGTGGGG CGCGCAGTTC GCCTACTACG CGGTGCTGGC CGGCGTGTTC
GTGACGGCGT TCTATTCGTT CCGCATGTAC TTCCTGGTGT TCCACGGCAA GGAGCGCTAC
GACCAGAACC CCGACGCGCA TCACCACGAC GAACATGCGG AGCACGACGA CGACCATGGC
CACGGCCACA AGCCGCACGA ATCGCCCTGG GTGGTGTGGC TGCCGCTGGT GCTGCTGGCG
ATCCCGTCGG TGGTGATCGG CTTCATGACG ATCGAGCCGA TGCTCTTCGG CGAGTTCTTC
AAGGGCGCCA TTGCTGTCGA CGCAAACAAG CACCATGCCA TGAAGGAGCT CGCAGAAGCC
TTCCACGGCC CGATGGCGAT GGCCATCCAT GGCCTGCAGA CCCCGCCGTT CTGGCTGGCC
CTGGCGGGCG TGGTGCTCTC GTTCTACATG TACATGGTCA ACCCGGCGCT GCCGGCCGCG
ATCAAGCGCG CCTTCGGCCC GGTCTACCGC CTGCTCGACA ACAAGTACTA CCTCGACTGG
ATCAACGAGA ACATCATCGC CCGCGGTGCG CGTGCCTTCG GCACCGGGCT GTGGAAGGGC
GGCGACCAGG CGCTGATCGA CGGTGCGGTG GTCAACGGCT CGTGGAAGGT GGTTGGCCGC
GTCTCCGGCG CGGTGCGCTG GCTGCAGTCG GGCTACATCT ATCACTACGC CTTCGCGATG
CTGCTCGGCA TCTTCATCCT GATGACGTAC TTCGTCTGGT TCAAACGCTG A
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| Protein sequence | MSATLSASTL LAVPLAPLVG AVVAGLFGTQ FGGNHIGRKV THSLTILGVL VAFIISAMTL
KSVVADGARF NATIYEWMMV GGLKMEVGFL VDGLTAMMMC VVTFVSLMVH VYTIGYMEED
EGYNRFFAYI SLFTFSMLML VMSNNMLQLF FGWEAVGLVS YLLIGFWFNK PTAIFANMKA
FLVNRVGDFG FILGIGLIAA YAGTLNYGEA FAKANTLAGI TFPGTEWMLV TVICICLFIG
AMGKSAQFPL HVWLPDSMEG PTPISALIHA ATMVTAGIFM VARMSPLFEL SDTALSFILV
IGAITALFMG FLGIIQNDIK RVVAYSTLSQ LGYMTVALGA SAYSVAVFHL MTHAFFKALL
FLGAGSVIIG MHHNQDIRWM GGVRKYMPIT WITSLLGSLA LIGTPFFAGF YSKDSIIEAV
HESHLWGAQF AYYAVLAGVF VTAFYSFRMY FLVFHGKERY DQNPDAHHHD EHAEHDDDHG
HGHKPHESPW VVWLPLVLLA IPSVVIGFMT IEPMLFGEFF KGAIAVDANK HHAMKELAEA
FHGPMAMAIH GLQTPPFWLA LAGVVLSFYM YMVNPALPAA IKRAFGPVYR LLDNKYYLDW
INENIIARGA RAFGTGLWKG GDQALIDGAV VNGSWKVVGR VSGAVRWLQS GYIYHYAFAM
LLGIFILMTY FVWFKR
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