| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3476 |
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| Symbol | |
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| ID | 7972587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3660164 |
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| End bp | 3661588 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 73% |
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| IMG OID | 644794060 |
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| Product | beta-lactamase |
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| Protein accession | YP_002945359 |
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| Protein GI | 239816449 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1680] Beta-lactamase class C and other penicillin binding proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGGCTTT CTTGCTCCGC CTTGGCCCGC CGATGGACGG CCGCCTGGCT TGCTGCCCTG
CTGCCGGCCG CCGCCGCATG GACACAGCCG CTGCCCATCA CCCTGGCCAG CGAACCCGCC
GCCATCGCGA AGACGGCGCT GGGCGCCGAA AGGGGAACGC TGGTGGTCGG CGTGCTGCGC
GGCGGCAACG CCGCCTATGG CATGGCGCAC AACCCGGAGC CCGCTGCGGC GCCGCGCGCC
ATCGAGCCGA ACAGCGCCGA GCAGCCGATG TTCGAGATCG GCTCCGTGAC GAAGGTGTTC
ACGGGCCTGC TGCTGGCGCA GTCGGTGGAG CGTGGCGAGG TGAAGCTCAA CGACACCGTG
GGCCAGCTGC TGGCCGGCAA GTTGGCGGCG CGGCTCTCTC CTGCGGTGGC CTCCGTGACG
CTGCGCCAAC TGGTGACCCA CACCGGCTGC ATGCCCGTGA TGGCCGATGG CGTGGCCGGC
GGGCCCGCGC TGGCCGCGCA GTTCCGTGCC TTCGACAAGG CGGCGTTCTG GGATGCGCTG
TCGCGCATCC GGCTCACGGC GCCGGCGCCG CCCTGCGAAG CGGCGTACAG CAATTTCGGG
ATGGCGCTGC TGGGCCAGGT CCTGGCCGAA CGGCTCGGCA CCACCTGGGG CGAGCTGGTG
CGCGCGCGCA TCACCGAGCC GCTGGGCATG AACGACACGG TGATCCAGCT CGGCGACAAG
GCCTCGCGCA TGGCACCGGC CTTTGCCGGC GACCGTCGCC AGCGGCTGCT CGACATGGCG
GCCTATGCGC CGGCCAGCGC GCTGCGTTCC ACGGCGGCCG ACATGCTCAC GCTGAGCCGC
GCGATCCTCG CCGGCGCCAG CGGTCCGCTG GGCCCCGCGG CCGTGCGCAT GCTCACGCCG
CTCGCGCGCT ACGAAGGCGC CGAGATCGGC TATGCGGTGA TGGTGCGCGG CCCCGAGGGC
GGCCGGCGCA CCTACTACCA CGCCGGCGTG ACCGAGGGCT ACCGCACGCT GTGGCTGCTT
GCGCCCGACA CCGGAGAAGC ACTGATCGTG CTCGGCAGCA ATGCGCGCGC GCCGCTTCAG
TCCGTGATGC TGGCCATCGG CAAGAGCCGC TATCCGGTGC CGACCGCCCC GGTGCCGATC
GATCCGCAGC GCCTTGCGGA CTACGAAGGC GAGTTCCGCA TCAACAGGGC CAAGACGCTG
GGCTTTGCGG TGCGCAGCGG CCGCCTGCTG GTGCGCGAAA CGGGCCGGGG CTACAACGCG
CTCACGCCCA TCGGCAGCGA CCGCTTCGCG GTCACGGCCA TCGGCGCCGA GGTCAGGTTC
CGGCGCGGCG AAGGCAACGC GGTGGTCGGC GTGACGCTGG CGCAGGGCGG CAGCCGGCTC
GATGCGCAGA GGGTGGGCGA GGCGGTGGCC GCTCCGCAGG ATTGA
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| Protein sequence | MRLSCSALAR RWTAAWLAAL LPAAAAWTQP LPITLASEPA AIAKTALGAE RGTLVVGVLR
GGNAAYGMAH NPEPAAAPRA IEPNSAEQPM FEIGSVTKVF TGLLLAQSVE RGEVKLNDTV
GQLLAGKLAA RLSPAVASVT LRQLVTHTGC MPVMADGVAG GPALAAQFRA FDKAAFWDAL
SRIRLTAPAP PCEAAYSNFG MALLGQVLAE RLGTTWGELV RARITEPLGM NDTVIQLGDK
ASRMAPAFAG DRRQRLLDMA AYAPASALRS TAADMLTLSR AILAGASGPL GPAAVRMLTP
LARYEGAEIG YAVMVRGPEG GRRTYYHAGV TEGYRTLWLL APDTGEALIV LGSNARAPLQ
SVMLAIGKSR YPVPTAPVPI DPQRLADYEG EFRINRAKTL GFAVRSGRLL VRETGRGYNA
LTPIGSDRFA VTAIGAEVRF RRGEGNAVVG VTLAQGGSRL DAQRVGEAVA APQD
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