| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3473 |
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| Symbol | |
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| ID | 7972584 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3657037 |
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| End bp | 3658398 |
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| Gene Length | 1362 bp |
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| Protein Length | 453 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644794057 |
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| Product | oxidoreductase domain protein |
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| Protein accession | YP_002945356 |
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| Protein GI | 239816446 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4091] Predicted homoserine dehydrogenase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.0794903 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCCTTT ACACCCGCCT GCAGCAGCGC GCCGCCGAAA GCCGCCCCAT CCGCATCGGC
CTGATCGGCG CCGGCAAGTT CGGCTCGATG TACCTCGCGC AGATTCCGCG TACGCCCGGC
GTGCAGCTGG TCGCGATTGC CGACCTGTCG CCCGCGGCGG CGCGCGCCAA TCTCGAACGC
GTCGGCTGGA ACCCGGAGCG TGCCGCGGCG GGCTCGGTGC AGGAAGCCCT GAAGACGGGC
AGCACCTGGA TCACCGACGA CTGGCAGGCC GTGACGCGCG AACCCGCCAT CGACATCGTG
GTCGAGTGCA CCGGCAATCC GGTGGCGGCC GTCGAGCATT GCCTGGATGC GTTTGCGCAT
GGCAAGCACG TGGTCAACGT CACGGTCGAG GCCGATGCCT TCTGCGGCCC GCTGCTCGCG
CGCCGCGCGC AGCAGGCCGG CGTGGTCTAT TCGCTGGCCT TCGGCGACCA GCCCGCGCTG
ATCTGCGACC TGGTCGACTG GGCGCGCACC TGCGGCTTTC CGGTGGTGGC GGCCGGACGC
GGCCACAAGT GGCTGCCGCA CTTCACCGAA TCGACGCCCG AGACCGTCTG GGGCAACTAC
GGCCTGACGC CCGAACAGGC GCTGCGCGGC GGCCTCAATC CGAAGATGTT CAACAGCTTT
CTCGACGGCT CCAAGCCGTC CATCGAAAGC TCGGCGGTGG CCAACGCCAC GGGGCTCACC
GTGCCTTCGG ACGGCCTGCT CTACCCGCCC GCGAGCGTGG AGGACATTCC CTTCGTCACG
CGCCCCCGGA GCGAAGGCGG CGTGCTCGAA CGCAAGGGCA TGGTCGAGGT CATCTCCTCG
CTCGAGGCCG ACGGGCGAAA GATTCCCTAT GACATCCGCA TGGGCGTGTG GGTCACGGTC
GAGGCCGAGA CCGACTACAT CAAGAACTGC TTCGAGGAAT ACAACGCCCA CACCGACCCG
AGCGGGCGCT ACTTCACGCT CTACAAGCGC TGGCACCTGA TCGGCCTGGA GGTCGGCATG
TCGGTGGCCA GTGTCGCCTT GCGCGGCGAG CCGACCGGCG TGGCCACCTG CTGGAACGCC
GACGTGGTGG CCACGGCCAA GCGCGATCTC GCGCCCGGCG AGATGCTCGA CGGCGAAGGC
GGCTACACCG TCTGGGGCAA GCTGCTGCCG GCCGAGCGCT CGCTCGGCCT GGGCGGGCTG
CCCCTCGGGC TGGCGCACAG CGTCAAGTTG GTGCGACCGA TGAAGAAGGG CCAGAGCCTC
TGCTGGGCCG ACGTGGCCAT GGACACCTCG ACCTCCGCCT ACCGGCTGCG AAGCGAGATG
GAGGCCATGT TCGCCCCCGC CGCGCAGGCC AAGGCGGCCT GA
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| Protein sequence | MSLYTRLQQR AAESRPIRIG LIGAGKFGSM YLAQIPRTPG VQLVAIADLS PAAARANLER
VGWNPERAAA GSVQEALKTG STWITDDWQA VTREPAIDIV VECTGNPVAA VEHCLDAFAH
GKHVVNVTVE ADAFCGPLLA RRAQQAGVVY SLAFGDQPAL ICDLVDWART CGFPVVAAGR
GHKWLPHFTE STPETVWGNY GLTPEQALRG GLNPKMFNSF LDGSKPSIES SAVANATGLT
VPSDGLLYPP ASVEDIPFVT RPRSEGGVLE RKGMVEVISS LEADGRKIPY DIRMGVWVTV
EAETDYIKNC FEEYNAHTDP SGRYFTLYKR WHLIGLEVGM SVASVALRGE PTGVATCWNA
DVVATAKRDL APGEMLDGEG GYTVWGKLLP AERSLGLGGL PLGLAHSVKL VRPMKKGQSL
CWADVAMDTS TSAYRLRSEM EAMFAPAAQA KAA
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