Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3457 |
Symbol | |
ID | 7972568 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3641175 |
End bp | 3642131 |
Gene Length | 957 bp |
Protein Length | 318 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644794041 |
Product | hypothetical protein |
Protein accession | YP_002945340 |
Protein GI | 239816430 |
COG category | [S] Function unknown |
COG ID | [COG3181] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.778802 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAGAAAA GATTCTGGGT CGCGGCGGCA TTGCTCGCTG CCGGCGGCGC ACAGGCCCAG GCCATTCCCA AGACCATCCG CCTCATCGTG GCGTACCCCG CGGGCGGCGT CAGCGACGTG GTCGCGCGTG CGCTCGGCGA CAGGCTCGCC GCGCAAATGG GTACCACCGT GGTGGTCGAC AACCGCGCCG GCGCCAGCGG CGCCATCGGC ATGGATGCCG TGGCCAAGGC CGCACCCGAC GGTGCCACGC TGGGCTTTTC GGCCATCAGC CCGCTGGTGC TGAGCCCGCA CCTCGGCAAG CTGCCCTTCG ATCCGCTCAA GGACATTGCG CCGGTGGCGA GCGTGATGTA TTCGCCGGTG CTGCTGATCG CCACGCCGGC CAGCAGGGCG CGCGACTTCC GCGCGCTGAT CGCCGATGCC AAGGCGCAGC CCGGCGCGGT GCGCTGGGCC ACCTCGGGGC CGGCATCGCT CGGCCACATC GTGCTCGAGC AGGTGAAGGC GGCCACGGGC GTCGATATCA CGCACGTGCC CTACAAGGGC GGCGGCCAGC AGCTCAACGA TGCGCTCGGC GGGCAGTTCG AGATTCTCTC GAGCAATGCG AGCCCCACGC TCACTTCGCA CATCCGCTCG GGCAAGCTGC GTCCGCTGGC CGTGGGTGCG CCCGCGCGGC TCGAGAGCCT GCCGCAGGTG CCCACGCTGG GCGAGCTGGG CTTCAGTGCC GCGAACATCA ACTCGGTGTT CGGCGTCTTC GCGCCCGCGG CCACGCCGCC CATATTGATC GAGAAGTACA ACGCCGAGAT CAACAAGGCC CTGGCCAGCC CCGAGCTGCG CGCCAAGCTC ACGGCCACCG ACAACGTGCC GACCGGCGGC ACCCCCGCGG CCTTCGCTGC GGAGATCGCC TCGGAGTTCG AAGGCAATGC GCGCATCGTG AAGGCCGCGA ACATCAAGGC CGATTGA
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Protein sequence | MQKRFWVAAA LLAAGGAQAQ AIPKTIRLIV AYPAGGVSDV VARALGDRLA AQMGTTVVVD NRAGASGAIG MDAVAKAAPD GATLGFSAIS PLVLSPHLGK LPFDPLKDIA PVASVMYSPV LLIATPASRA RDFRALIADA KAQPGAVRWA TSGPASLGHI VLEQVKAATG VDITHVPYKG GGQQLNDALG GQFEILSSNA SPTLTSHIRS GKLRPLAVGA PARLESLPQV PTLGELGFSA ANINSVFGVF APAATPPILI EKYNAEINKA LASPELRAKL TATDNVPTGG TPAAFAAEIA SEFEGNARIV KAANIKAD
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