| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3410 |
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| Symbol | |
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| ID | 7972521 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3597384 |
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| End bp | 3598838 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793994 |
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| Product | major facilitator superfamily MFS_1 |
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| Protein accession | YP_002945293 |
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| Protein GI | 239816383 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2271] Sugar phosphate permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTGGAC CTGCACTCTC CTCCGGGCCC GACTCGCCCC GAGTCGCCGA GCTCGATCGC
GCGCTCGACA CCATCGGCGT CACGCGTTCG CACCACACGA TCATCTTCCT GATCCTCATC
GGCTGCCTGT TCGATGCCTT CGAGCAGAAC GCGGTGGGCA TCGTCGGCCC CATGCTGCGC
GAGCAGTGGG GGCTGAGTGC ATCGGACATC GGTTTCCTGA ACACCGTCAC CTTCGCCTGC
GCAGCCACCG GGCGCATCGT CTCGGGCTTC ATTGCCGACC GCTACGGGCG CCGCGTGATG
CTGTCGATCG ACCTGCTGCT GTTCACGCTC GGTGCGGGCA TCTGCGCGAT GGCACCGAAC
TTCACGGTGA TGGCGCTGGG CCGCGCGGTG GTGGGCTTCG GGCTGGGCGG CGAGATCGCC
ATTGCCGTGA CCATGCTGGC CGAGTTCTGC TCGACCAAGT TCCGCGGCAC GGCCGTGGGG
CTGGTGAACG TGGGCGCCGG CGGGCTCGGC AACTTTCTTG CGCCGGCTTT TGGCCTGCTG
GTGTTCTGGA TGTTCCCGGG CGACAACGCC TGGCGCTGGC TGTTCGCCTG CCTCATGGTG
CCGGCTCTGC TTGGCGCGTT CTATCGCCGC TTCATCCCCG AGACGCCGCG CTTCCTGCTG
TCGCAGGGCC GCGTCAGGGA GACCAACGCG GTGCTCTCGC GGCTGGCCTC GGGGCGGCTG
TCGGGCAAGC TGGCGGCCGA GCGTGAATAC ATCACCGACG ACCGCACGGC CGCGCAGCCC
GCACGGCCGA AGGTGCGCGT GACCGAAATA TTCCGCGGCG CGCTGGCGCG GCGCACCGCT
GCGCTGTGCA TCACGATCTG GATGACCTAC GGCGCGCAGA TCTCGGTGCT CACGCTGATG
CCGACCATCC TCGTGACGCT GGGCTACAGC ATGTCCAAGA GCCTGATGTT CACGATGGTG
ATGCAGGGCG GCAGCCTGCT GGGCGCCATT GCGGCCTCGC TGCTGGGCTT TCATTTTCCG
CGCAAGCGGG TGCTGACGGC CGGCGCCGTG TGCGCCTGCC TCGCGGCGCT GGCCATCGGC
TTCGTGGCCA AGAGCATCGC CGTGATCCTG GTCGCGGGCG CGGTGTTCCA GTTCTTCGTG
CTGCTGCTCA ACACCACCAT CTGGATCTTC GCCCCCGAGC TGTATCCGAC GCGCGTGCGC
GCCTTCGGCA CCGCTTTCAT CCTGGCCACG GGCACCGCCG CGGGCGCGCT GATGCCGCTG
GTGGCGGGCC GGCTGTTCGA CGCCTTCGGG CTGGTGGGTG TGTTCGGCCT GGCCGCCGCG
ATGTACGCGG TGTTCGTTGC CAGCGTGCAG TGCGTGCCCG AGACCTATGG CCAGTCGCCC
GATGCATTGC CGCTGGCCGG CGAGGCCGAG CCTGGCGACG GGGCGCCGGC AGCGTCGCTG
GCGCGTTCGA ACTGA
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| Protein sequence | MAGPALSSGP DSPRVAELDR ALDTIGVTRS HHTIIFLILI GCLFDAFEQN AVGIVGPMLR
EQWGLSASDI GFLNTVTFAC AATGRIVSGF IADRYGRRVM LSIDLLLFTL GAGICAMAPN
FTVMALGRAV VGFGLGGEIA IAVTMLAEFC STKFRGTAVG LVNVGAGGLG NFLAPAFGLL
VFWMFPGDNA WRWLFACLMV PALLGAFYRR FIPETPRFLL SQGRVRETNA VLSRLASGRL
SGKLAAEREY ITDDRTAAQP ARPKVRVTEI FRGALARRTA ALCITIWMTY GAQISVLTLM
PTILVTLGYS MSKSLMFTMV MQGGSLLGAI AASLLGFHFP RKRVLTAGAV CACLAALAIG
FVAKSIAVIL VAGAVFQFFV LLLNTTIWIF APELYPTRVR AFGTAFILAT GTAAGALMPL
VAGRLFDAFG LVGVFGLAAA MYAVFVASVQ CVPETYGQSP DALPLAGEAE PGDGAPAASL
ARSN
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