Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_3387 |
Symbol | |
ID | 7970625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 3566841 |
End bp | 3567821 |
Gene Length | 981 bp |
Protein Length | 326 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644793971 |
Product | hypothetical protein |
Protein accession | YP_002945270 |
Protein GI | 239816360 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAATTCG AACACCAGCA AGCGGCGCAT TGCGAAAGCG GCGTCATCTC GAACCTCATG CGCCACCACG GCGTGCCCAT GACGGAGAGC ATGGCGCTCG GCCTGTCGTC GGCGCTGTCC TTCGCCTACC TGCCGTTCAT CAAGCTCTCG GGCCTGCCGC TCATCTCGTA CCGCATGCCG CCCAAGGCCA TCATCAAGGG CCTGCTGGCA CCGATGGCCG CGCGCTTTCG CTTCGAGACC TTCCGCAGCG CCGAGGCCGG CGCGCAGCGC CTCGATGCGC TGCTCGCGGG CGGGCAGATC GTGGGGCTGC AGACCTCGGT CTACTGGCTG CCGTACTTTC CGCCCAACAT GCGCTTCCAC TTCAACGCGC ACAACCTGCT GGTGTACGGC AAGGACGGCG ACGACTACCT GATCAGCGAC CCGGTGTTCG AGGAGCCGGT GCGCTGCGCC AGCGCCGATC TTTCGCGAGC GCGCTTCGCC AAGGGCGTGC TCGCGCCCAA GGGCCTCATG TACTACCCGC AGGCCATCGA GCGCAAGACG GTCGATGCGG CGTCGGTGAC CAAGGCGATC CGCAAGACGG TGCGCACCAT GCTCGCGCCG GTTCCGATCG TCGGCGTGCG CGGCATGCGC ACGCTGGCCA GCCGCATGCA GAAGCTGTCG CCGGGCGATC CACGCAGCGT CGACTTCATC GGCCACGTGG TGCGCATGCA GGAAGAAATC GGCACGGGCG GGGCGGGCTT CCGCTTCATC TACGCGGGCT TCCTGCAGGA GGCGGCGCAG CTGCTCGACA AGCCGCAGCT GCAGCAGATG TCCGAGCGGC TGATCTCCAT CGGCGACGAT TGGCGTGCGT TTGCACTCAA GGCCGCGCGC ATGGTGAAGG GCCGCGAGCC GGTCGATCCC GCGGCGCTGG CCGGCAAGCT GCGCGAGCAG GCGCAGCAGG AAGAAACCTT CTTTCGCGAC CTCAGGGCCG CTGTTGCCTG A
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Protein sequence | MKFEHQQAAH CESGVISNLM RHHGVPMTES MALGLSSALS FAYLPFIKLS GLPLISYRMP PKAIIKGLLA PMAARFRFET FRSAEAGAQR LDALLAGGQI VGLQTSVYWL PYFPPNMRFH FNAHNLLVYG KDGDDYLISD PVFEEPVRCA SADLSRARFA KGVLAPKGLM YYPQAIERKT VDAASVTKAI RKTVRTMLAP VPIVGVRGMR TLASRMQKLS PGDPRSVDFI GHVVRMQEEI GTGGAGFRFI YAGFLQEAAQ LLDKPQLQQM SERLISIGDD WRAFALKAAR MVKGREPVDP AALAGKLREQ AQQEETFFRD LRAAVA
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