| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3342 |
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| Symbol | |
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| ID | 7970580 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3521049 |
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| End bp | 3521981 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793927 |
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| Product | Gluconolactonase |
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| Protein accession | YP_002945226 |
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| Protein GI | 239816316 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3386] Gluconolactonase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.984063 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCATCG AAGTCTTCGA CGCCCGTTTC GCATCCGTGG TCCATGGCGC CCCGCCGCTC
GAACGCCTGT GCACCGGGGC GGCATGGAGC GAAGGCCCGG TGTGGATGCA CGAAGACGGC
GCGGTGCTCT GGAGCGACAT TCCCAACAAC CGCATGCTGC GCTGGCACGC CGACACCGGC
ATGAGCGTGT GGCGCGAAGG CGTGGAGTTC ACCAACGGCC ACACGCGCGA GGCCGATGGC
GCCCTGCTCC ATTGCTCGCA CGGCCGGCGT GCCATCGTGC GCACCCGCTT CGGCCCGGGC
TTCGTGCCGC TGGCCGACGA GGTCGTGGTC GACCGCTACC AGGGCCGGCG CCTCAACTCT
CCGAACGACG TGGTCGTGAA GCGCGACGGC AGCATCTGGT TCACCGATCC GCCCTACGGC
ATCGTCTCGG ACCATGAAGG CCACAAGGCC GAGAGCGAAC TGGGCCGCAA CCATGTCTTT
CGCTTCGACC CCGCCACCGG TGCGCTGCGT GCGGTGAGCG ACTTCATCGA AGAGCCGAAC
GGCCTGGCCT TCTCGCCCGA CGAAAGCATC CTTTATGTGA GCGACACCTC GGCCGCGTTG
CGCACCGACG GCTCGGGCCA CCACCACATC GTCGCCTTCG ACGTGATCGG CGGACAGGAC
CTCGCCAACC CGCGCGTGTT CGCCATGGTG AACCCGGGGC TTTCCGATGG CTTTCGCATC
GACGTGAACG GGTTCCTCTA CACGAGCAGC GCCGACAGCG TGCAGGTCTA CCACCCCGAC
GGCACGCGCA TGGCGCGCAT CGCCGTGCCG GAAAAGGTGG GCAACCTCAC CTTCGGCGGC
AGCGGCGGCA GCGACGGCAA CGCGCTCTAC GTGTGCGCCT CCACTTCGCT CTATCGCATC
CGCCTCCACA CGCGCGGAGC GACCTGCCCA TGA
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| Protein sequence | MTIEVFDARF ASVVHGAPPL ERLCTGAAWS EGPVWMHEDG AVLWSDIPNN RMLRWHADTG
MSVWREGVEF TNGHTREADG ALLHCSHGRR AIVRTRFGPG FVPLADEVVV DRYQGRRLNS
PNDVVVKRDG SIWFTDPPYG IVSDHEGHKA ESELGRNHVF RFDPATGALR AVSDFIEEPN
GLAFSPDESI LYVSDTSAAL RTDGSGHHHI VAFDVIGGQD LANPRVFAMV NPGLSDGFRI
DVNGFLYTSS ADSVQVYHPD GTRMARIAVP EKVGNLTFGG SGGSDGNALY VCASTSLYRI
RLHTRGATCP
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