| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3281 |
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| Symbol | |
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| ID | 7973677 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3455708 |
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| End bp | 3456286 |
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| Gene Length | 579 bp |
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| Protein Length | 192 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793866 |
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| Product | uncharacterized peroxidase-related enzyme |
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| Protein accession | YP_002945165 |
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| Protein GI | 239816255 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2128] Uncharacterized conserved protein |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR01926] uncharacterized peroxidase-related enzyme |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.366271 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCGACC GCTACCCCCT CGCCGAGCTC AAAGACCTGC CGGAAGACAT CCGCACCGCG
ATCCTCGCGG TGCAGGAAAA AGCCGGCTTC GTGCCCAACG TGTTCCTCGC GCTGGCGCGC
CGCCCGGCCG AGTGGCGCGC CTTCTTCGCC TACCACGACG CGCTGATGCT GAAGGAGGAA
GGCTCGCTCA CCAAGGGCGA CCGCGAGATG ATCGTCACCA CCACCAGTGC GGCCAACCGG
TGCCTCTACT GCGTGGTGGC GCACGGCGCG CTGCTGCGCA TCTACGAGAA GAAGCCGCTG
GTGGCCGACC AGGTGGCGGT GAATTACCGC AAGGCCGACA TCACGCCGCG CCAGCGCGCC
ATGCTCGACT TTGCGATGAA GGTCTGCGAA CGCTCGCATG AAGTCGAGGA CGCGGACTTC
GCCGCGCTGC ATGCCCACGG CTTCGACGAC GAGGACATCT GGGACATCGC CTCCATCACC
GCCTTCTTCG GCCTGAGCAA CCGCCTCGCG AGCTTCAGCG GCATGCAGCC GAACACCGAG
TTCTTCCTGA TGGGGCGGCT GCCGCGCGAG AAGAAGTAG
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| Protein sequence | MADRYPLAEL KDLPEDIRTA ILAVQEKAGF VPNVFLALAR RPAEWRAFFA YHDALMLKEE
GSLTKGDREM IVTTTSAANR CLYCVVAHGA LLRIYEKKPL VADQVAVNYR KADITPRQRA
MLDFAMKVCE RSHEVEDADF AALHAHGFDD EDIWDIASIT AFFGLSNRLA SFSGMQPNTE
FFLMGRLPRE KK
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