| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3218 |
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| Symbol | |
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| ID | 7973451 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3397213 |
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| End bp | 3398085 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644793803 |
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| Product | alpha/beta hydrolase fold protein |
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| Protein accession | YP_002945102 |
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| Protein GI | 239816192 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.14106 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTCCA TTCCCGATCC AGATCTCAAT ACAGAAGCCC GCCTCTTGAT CGAACGCATC
GCCGCGCGCG GCACGCGCCA TGACGTGGTG CACGGCGGCG TCCGCGTTGC TTGGCGCCGC
TTCGGCGATG AGAACATCCA TGCGCCGCTG GTGCTGCTGC ACGGCGGCCA TGGCAGCTGG
ATGCATTGGC TGCGCAACGT CGAGGCGCTC TCGGCCGGGC GCACGCTGTG GCTGCCCGAC
ATGCCCGGCT TCAACGATTC CGACGCGCCG CCGCGCGCCG TGCCCGGCGA AGATCCGCTC
GGCCCGCTGC TCGATGCGCT GGGTGGATCG CTCGACCAGC TGATCGGCGC GGGCACGCCC
ATCGACCTGG GCGGCTTCTC CTTCGGCGGG CTCACCGCCG CGCGCTTCGC GGTGCGGCGC
GGCGCCATCC GGCGCCTCGC GCTCGTGGGC AGTGGCGGCC ACGGCACGAT GCGGCGCATG
GCGGTGGAGA TGATCAACTG GCGCGCCGCG CCCGATCGCG AGCAGGAACG CGCCGCGCTG
CTGCACAACC TGGCCGCGCT CATGCTGCAC GACAAGGCCG CGATCGATCC GGTGGCCTTC
GAGATCCACG ACATCTCCTG CCACGGCACG CGCTTTCGCA GCAAGGAGGT GTCGCAGGCG
GGCGGCCTGC AGGCAGCGCT CGACACGCTG GGCGGACCGC AGTTGCTGCT CTGGGGCGAG
TACGACGTCA CCGCCGATCC GCGCCCGCTG GTGGCCCAGC TCACGGCCGG CCATCCGCAG
CGCGAAGGCG TGGTGATCGA CGGGGCAGGG CATTGGGCGC AGTACGAGCG CGCCGATGAT
TTCAACAGGC TGCTGCTGCG CTTCCTGGGC TGA
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| Protein sequence | MPSIPDPDLN TEARLLIERI AARGTRHDVV HGGVRVAWRR FGDENIHAPL VLLHGGHGSW
MHWLRNVEAL SAGRTLWLPD MPGFNDSDAP PRAVPGEDPL GPLLDALGGS LDQLIGAGTP
IDLGGFSFGG LTAARFAVRR GAIRRLALVG SGGHGTMRRM AVEMINWRAA PDREQERAAL
LHNLAALMLH DKAAIDPVAF EIHDISCHGT RFRSKEVSQA GGLQAALDTL GGPQLLLWGE
YDVTADPRPL VAQLTAGHPQ REGVVIDGAG HWAQYERADD FNRLLLRFLG
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