| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3213 |
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| Symbol | |
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| ID | 7973446 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3391318 |
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| End bp | 3392613 |
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| Gene Length | 1296 bp |
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| Protein Length | 431 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793798 |
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| Product | protein of unknown function DUF521 |
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| Protein accession | YP_002945097 |
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| Protein GI | 239816187 |
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| COG category | [S] Function unknown |
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| COG ID | [COG1679] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCACCTGA GCGATGAAGA AAAAGCCATG ATGGACGGCC GCGACGGGCC GGCCGTGCAG
AAGGCGATGG ACCTCCTGAT GCGCTACGGC GAAGCGCTCG GCGCCGAGCG GCTGGTGGAA
ACGCGCAACG TCTGCGCCAC CATCACCTCG ACCACGCCGT TCCAGCGCGA CTTCGCGCTG
GCCAAGGGCG GCGGCATGGA CGCGGTGTTC TCCGAGTTCA GCCTCGACAG CCAGGAAACC
GTCGAGATCC CGAAGTTCAA GGTCTTCACG AGCCACCTGC AGCTGGGCTT CGACCCCGGC
CAGCCCGAGC GCATGGGCGT GAGCGAGGAG ATCGTGCAGT TCTACAACAA GAGCGAGCGG
CATGCGGCAG GCCTGGGCGC GCAGATCATG AACACCTGCA CGCCCTACCA GGTCGGCAAC
ATCCCGACGC GCGGCGAGCA CTGCGCGTGG ATGGAATCGT CGGCCGTGGT GTATTGCAAT
TCGGTGCTCG GTGCGCGCAC CAACACCGAA GGCCGCGAGA GCACCGGCGC CGCCATGCTC
ACGGGGCGCA TTCCGTACTG GGGCTACCAC CTCGACGAGA ACCGGCATGC CACGCACGTG
GTCGAGCTCG ACGTCGAAGT GGAATCGGTG CAGGACTGGG GCCTCCTGGG CTACTACATC
GGCGAGCATG TGCAGGAGCG CGTGCCGGTG GTGCACAGCA AGCGCGGCAT CGCCCGCGTG
CCCAACCTGC CGCGGCTCAA GCACTTCGGC GCGGCGGCAT CGTCGTCGGG CGGCGTGGAG
ATGTACCACA TCGCGGGCAT CACACCCGAG GCGCTGACGC TCGAGCAGGC GCTCGGCGGC
CGCGCGCCGG TGGAGGTGCT GCGCTTTGGC GAAGCCGAGC GCCGCGCCAC CTACGAGAAG
ATCAACGCCA CCGGCAAGGA CGCCGAGGTG CAGTACGTGA TGCTCGGCTG CCCGCACTAC
ACCATCGAGC AGATCTGGGA AGCCGCGCAG CTCATCGAGG GCCGCCGCGT GCACCCGGAT
TGCGAGCTGT GGATCTTCAC GCCGCGCGCC ATCAAGTCGC TGGCCGACCG CAACGGCTAC
ACGAAGATCA TCGAGGACGC CGGCGGCATC CTCATGACCG ACAGCTGCTC GGCCATGAGC
CGCGCCGTGC CCAAGGGCAC GAAGACCGTG GCGCTCGATT CGGCCAAGCA GGCGCACTAC
CTGCCCGCGA TCCTCGGCGT GCAGGCGTGG TTCGGCAGCA CGGCGGAGTG CATCGATGCG
GCGTGCACCG GCCGCTGGAA CGGGGGAATG CAATGA
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| Protein sequence | MHLSDEEKAM MDGRDGPAVQ KAMDLLMRYG EALGAERLVE TRNVCATITS TTPFQRDFAL
AKGGGMDAVF SEFSLDSQET VEIPKFKVFT SHLQLGFDPG QPERMGVSEE IVQFYNKSER
HAAGLGAQIM NTCTPYQVGN IPTRGEHCAW MESSAVVYCN SVLGARTNTE GRESTGAAML
TGRIPYWGYH LDENRHATHV VELDVEVESV QDWGLLGYYI GEHVQERVPV VHSKRGIARV
PNLPRLKHFG AAASSSGGVE MYHIAGITPE ALTLEQALGG RAPVEVLRFG EAERRATYEK
INATGKDAEV QYVMLGCPHY TIEQIWEAAQ LIEGRRVHPD CELWIFTPRA IKSLADRNGY
TKIIEDAGGI LMTDSCSAMS RAVPKGTKTV ALDSAKQAHY LPAILGVQAW FGSTAECIDA
ACTGRWNGGM Q
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