| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3194 |
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| Symbol | |
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| ID | 7973427 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3368514 |
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| End bp | 3369602 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644793779 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_002945078 |
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| Protein GI | 239816168 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACAAGT ACCTGTTCTA CGACACGATC CGCCTGAACC GCGGCGCGGG CGGCGTGCTG
AACGTGTCGG ACCTGCTGCT GCGCAGGATG CGCCTGTGCA AGGGCGACCA CATCCAGCCG
GCCAGCGAAC GGCATCCGCG CCTCTTCGCG GTGGCACGGC GCCTGCGCAT CAGCCGGTTC
CTGGTCGAGA TACTGCTCTA CAACTACCAC CGGCTGCAGG CGCTGGTATC GGGCGAGCGG
GTGTTCTCGC TGTTTCCCAA CTACTTCCTG CCGTTCACGC TGTTCGGGCG CCACCGGGAT
TCGATCGTGA TCGTCCACGA CCTGCAGTAC CGCTACTACC CCGCGTACTT CAGCCGCACC
AAGCGCCTGT GGCTCGACTG GAACCTCAGG CGCGTGGCCC GCAGCGCGGC CGACGTGGTG
TTCATCAGCA GGAGCAGCCA GCAGGATTTC GAGCGGTACT TCGGATGCTG CGAGCACGCG
AGCGTCATCT TCAACCCGGT GGAGGCCACG CGCGCGGCCG GCTCGGCCAG CGCGTCCCGC
GAGCCGCCCG TGGGCGAGCG CTACCTGATC GCGTCCTACC ACTACTACCC GCACAAGAAT
TTCGGCGCCG CGCTGAAGCT CTTCGAGCGC ATGAAGCGCG AGGGGCTGGT CGACTGGCTC
GACATCACGG GCAACGGCGC GGCCGAGGTG AAACGGATGG TCGCCAGCAT GGCACCCGAG
CTCGGCAACT GCGTGCGGCA CCGCGGGCTG GTCTCGCGCC AGGACCTGAC GCGGCTTTAT
TGCGGCGCCA CGGCCTTCAT CTCGCTGTCG GCCTTCGAGG GCTTCAACCT CTCGGCCGCC
GAAGCCGCCA CCCTGGGCGT GCCGCTGCTG CTCTCGGACA TTCCGGTGCA CCGCGAGCTG
TTCGGCGGCT ACGCCTTCCT GATCGGCAGC GAGCCATGCG ACATGGGCCG GCTGGCGCGC
TACCTGGACG AGCACCGGGA CACGCAGCCG CCCTGGCTGC ATGCCGAAGC CTGCGCGCCC
GGCGCGGTGG CCAGGCGCTA TCTCATGCTC AAGCGCGAGG CCGTCTCGCT GGCCGGAGCC
ATGCAATGA
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| Protein sequence | MYKYLFYDTI RLNRGAGGVL NVSDLLLRRM RLCKGDHIQP ASERHPRLFA VARRLRISRF
LVEILLYNYH RLQALVSGER VFSLFPNYFL PFTLFGRHRD SIVIVHDLQY RYYPAYFSRT
KRLWLDWNLR RVARSAADVV FISRSSQQDF ERYFGCCEHA SVIFNPVEAT RAAGSASASR
EPPVGERYLI ASYHYYPHKN FGAALKLFER MKREGLVDWL DITGNGAAEV KRMVASMAPE
LGNCVRHRGL VSRQDLTRLY CGATAFISLS AFEGFNLSAA EAATLGVPLL LSDIPVHREL
FGGYAFLIGS EPCDMGRLAR YLDEHRDTQP PWLHAEACAP GAVARRYLML KREAVSLAGA
MQ
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