| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3188 |
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| Symbol | |
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| ID | 7973421 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | + |
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| Start bp | 3361009 |
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| End bp | 3361896 |
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| Gene Length | 888 bp |
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| Protein Length | 295 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793773 |
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| Product | hypothetical protein |
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| Protein accession | YP_002945072 |
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| Protein GI | 239816162 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.657614 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCATGA TCACCATTCC CATGTACCGG GCGCCGGCCG ACGTCGCCTG CCTGATGCTC
AACATGGGCG CCAACCACCG GGTCGGGCCG CGCCGCATCA ACGTGAAGCT GGCGCACGTG
CTGGCCGCGC GCGGCGTGAG CAGTCTGCGC TTCGACCTTG GCGGCGTGGG GGACAGCGAC
GCGTCCGACG CCTCGTCCGA CCTGCAGGCC CGCGCGGTGC GCGACCTGCG CGCCGGCATG
GACCTTCTCG AGAACATGCT GGGCATCCGC AAGTTCGCGA TCGTGGGCAT GTGTTCGGGC
GTGGAGCACG CCATGACCGC GGCCGCGACG GACACGCGCG TGGTGGCGCT CTCGCTGTTC
GACGGCTTCG CCTTTCCGGA CCGGCGCTCG CGCTGGGAAC GCACGCTGCG GCGCGCGCTG
GCGGCGCCTG CGCATCCGTC GTTCGCGGGC AAGGCCAAGC GTTGGCTGCA GCGCCACCTG
CTGCCCAGCC ATTCGACCAA GCCGCTGCCC GGCTTCTTCG CCGAACGCAA GCCGCCCGAG
GTCAACGCCG TGTGGTTCGG CGCCACCATG CGGCGCCTGG TCGAGCGCAA GGTGGCGGTG
CAGCTGCTCT ATTCGGGCTC GCTGCATGTC TGCGACCACG ACCGCGACCA GCTCGGCCCG
TTCCGCAGCG AACCGTTCGC GCAGGCCGTG CAGTACGAAT TCATGCGCGA AGCCGACCAC
ACGCTGTGCA CGGCGCGGGG ACAGCAGCTG TTCCTGCGCT CCGTCGGCGG CTGGGTGGCC
GCCTGCGCCA TCGGCGCCGG CCCGGAACGC CGCAGCCCCA GCACCAGCCC GAGCCCGCTC
GCACCCGTCG TGGAGCGCCC CGAGCACGGC GCCTACGTCC CGCAGTGA
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| Protein sequence | MGMITIPMYR APADVACLML NMGANHRVGP RRINVKLAHV LAARGVSSLR FDLGGVGDSD
ASDASSDLQA RAVRDLRAGM DLLENMLGIR KFAIVGMCSG VEHAMTAAAT DTRVVALSLF
DGFAFPDRRS RWERTLRRAL AAPAHPSFAG KAKRWLQRHL LPSHSTKPLP GFFAERKPPE
VNAVWFGATM RRLVERKVAV QLLYSGSLHV CDHDRDQLGP FRSEPFAQAV QYEFMREADH
TLCTARGQQL FLRSVGGWVA ACAIGAGPER RSPSTSPSPL APVVERPEHG AYVPQ
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