| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3087 |
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| Symbol | |
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| ID | 7974297 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3243978 |
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| End bp | 3244955 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793672 |
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| Product | tRNA(Ile)-lysidine synthetase |
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| Protein accession | YP_002944972 |
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| Protein GI | 239816062 |
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| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
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| COG ID | [COG0037] Predicted ATPase of the PP-loop superfamily implicated in cell cycle control |
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| TIGRFAM ID | [TIGR02432] tRNA(Ile)-lysidine synthetase, N-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGAAG CCTTCGAACG CGCCATGGCC GCGTTCGAGC CGGCGCATCT GCCGCTGGCG
GTGGGCTTCA GCGGCGGCGC GGATTCCACG GCGCTGCTTG CCGCTTGCGC CTCGGCCTGG
CCCGGGCAGG TGCTTGCCTT TCATGTGCAC CACGGCCTGC AGGCCGCGGC CGATGATTTC
GAGCGCCATT GCGCGGCCGT GTGCGAACGC CTCGGCGTGC CGCTCGCGGT GCACCGCGTG
GACGCGCGCC ATGCGCAGGG CGACAGCCCC GAAGATGCGG CGCGCCGCGC CCGCTACGAC
GCTTTTGCAG CCATGGCGCG CATGGATACG GCGCTTGGCG CTATCGAATC GATAGTCCTC
GGGCACCATG CGGACGACCA GGTCGAAACC CTTCTGCTGG CCCTCTCCCG GGGCGCCGGC
CTGCCGGGCC TCGCGGCCAT GCCCGCGCAT GTGCGGCGCA ACGGGCTGGA CATCTACCGC
CCGCTGCTGG CCGTGCCCGG AGCCGACATC CGCGCGTGGC TCAAAAGCGT CGACCTGCCG
TGGATCGAGG ACCCGACCAA CGAGGACGAG CGCTACACCC GCAACCGGAT CCGGGCCGTG
CTGCTGCCCG CGCTCGCACG GACCTTCCCG CAGTTCCGCG CCACCTTCGC GCGCAGCATC
GGCCATGCCG CGCAGGCGCA GGAACTGCTG GGCGAACTCG CGGCGCAGGA CCTGGTCGTG
GTGGGCAACC CGCCCCGCAT CGCCGCGCTG CAGGCGCTTT CACGCGCGCG GCAGGCCAAT
GTGCTGCGGC ACTGGCTGAT GCAGGCGCAC GGCTGCGCGC CCAGCGCGGC GCAGCTCGAC
CAGCTGCTGG ACCAGGTCCG GGCCTGCACC ACCCGCGGCC ACCGGATCCA CCTCAAGGTG
GCCAATGGAT TCGCCCAGCG CAGGGGCGAC CTGCTGCATT GGTACAATTC CGGGCCCTCG
CCCAAGGCTT CGCGCTGA
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| Protein sequence | MNEAFERAMA AFEPAHLPLA VGFSGGADST ALLAACASAW PGQVLAFHVH HGLQAAADDF
ERHCAAVCER LGVPLAVHRV DARHAQGDSP EDAARRARYD AFAAMARMDT ALGAIESIVL
GHHADDQVET LLLALSRGAG LPGLAAMPAH VRRNGLDIYR PLLAVPGADI RAWLKSVDLP
WIEDPTNEDE RYTRNRIRAV LLPALARTFP QFRATFARSI GHAAQAQELL GELAAQDLVV
VGNPPRIAAL QALSRARQAN VLRHWLMQAH GCAPSAAQLD QLLDQVRACT TRGHRIHLKV
ANGFAQRRGD LLHWYNSGPS PKASR
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