| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3064 |
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| Symbol | |
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| ID | 7973784 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3220940 |
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| End bp | 3221770 |
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| Gene Length | 831 bp |
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| Protein Length | 276 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 644793648 |
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| Product | formylmethanofuran dehydrogenase subunit C |
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| Protein accession | YP_002944949 |
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| Protein GI | 239816039 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2218] Formylmethanofuran dehydrogenase subunit C |
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| TIGRFAM ID | [TIGR03122] formylmethanofuran dehydrogenase subunit C |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGGTT GGCACTTCAG GCTGCGGCAG GCGCCCGCGC TGCGCGTCGA TCTGCGCGGC
ATCACGCCGG CCGCGGTCGC GGAACTCTCG GCTGCGCAGG TCGGGCAGCT GCGCGTGGGC
CATGGCAACG CGATGCTGGC GCTGGCCGAG CTGTTCGATG TTGCGCCCGG GACGGAGGAG
GGCACACTTC GCTTCGAAGG CGATCTCGGG CGCTTCGACC GCATCGGCTG GCAGATGGAC
GGCGGGAGCA TCCGCGTCGA GGGCGATGCG GGCCACTATG CCGGCGGCTG CATGCGCGGC
GGCGCGCTGC AGATCGATGG CAGTGCCGGC CTGCTGGCCG CCTGCGAAAT GGCGGGCGGC
CGCATCGACG TGAAGGGCGA CGTCGGCGAC TTCGCGGCCA GCACCTTGCC CGGCAGCATG
GACGGCATGC GCGGCGGCAC CCTCGTGGTC CATGGCCATG CGGGCGAGCG CTTCGGCGAC
CGCATGCGCC GCGGGTCCGC GATTGTCCAT GGCGATGCGG GCGCGTTCTT GGGCTCGCGC
ATGGTGGCGG GCACGATCGC CGTCGGCGGC AAGGCCGGCG CGCATGCGGG CTACGGCATG
CGCCGCGGCA GCATCGTTTT TGCAGCGCCG GGCGCGGCGC TGCCGGCGGG CATCGAGGCG
GCGTTGACCT TTGTGCCGAA CCCCACCGCA ACGCCGGTGT TCTGGGCCCT GCTCGCGCGC
GATCTCGCGC GGCACGGCGG AGCTTTTGCG GCCTTGCCCG CACGCCGCAT CGAACGCCAC
CTGGGCGATC TTTCAGCCGA TGGCAAGGGC GAACTCATCC TGTGCCCGTG A
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| Protein sequence | MSGWHFRLRQ APALRVDLRG ITPAAVAELS AAQVGQLRVG HGNAMLALAE LFDVAPGTEE
GTLRFEGDLG RFDRIGWQMD GGSIRVEGDA GHYAGGCMRG GALQIDGSAG LLAACEMAGG
RIDVKGDVGD FAASTLPGSM DGMRGGTLVV HGHAGERFGD RMRRGSAIVH GDAGAFLGSR
MVAGTIAVGG KAGAHAGYGM RRGSIVFAAP GAALPAGIEA ALTFVPNPTA TPVFWALLAR
DLARHGGAFA ALPARRIERH LGDLSADGKG ELILCP
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