| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_3016 |
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| Symbol | |
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| ID | 7973736 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3172446 |
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| End bp | 3173558 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793600 |
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| Product | transcriptional regulator of molybdate metabolism, LysR family |
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| Protein accession | YP_002944901 |
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| Protein GI | 239815991 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1910] Periplasmic molybdate-binding protein/domain |
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| TIGRFAM ID | [TIGR00637] ModE molybdate transport repressor domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCATGAAG TGCACATCAG GCCGCAATGG ACCATCCGCC AGACCGACGG CGCGGCCCTG
GCGCCGCGGG TGATCGAACT GCTGGTGCAG GTGCTGGAGC ACGGCAGCCT TTCGAGCGCC
TGCACCGCGT CCGGCGTGTC CTACCGCCAT GCCTGGGAGC TGATCCGACA GGGCGAAGCC
ATGTTCGGCC AGCCGCTGGT GGTGATGCAG CGCGGCAAGG GTTCCAGCCT CACGCCGCTT
GGCGAAAAGC TGGTGTGGGC CGACCGCCGC ATCACCGCGC GGCTGTCGCC GCTGCTGGAT
TCGTTGGCCT CCGAACTGGG CGCGGAAATC GAGAAGCTGA TTCCCACCGC GCCCACGCTG
CTGCGCATCC ACGCGAGCCA TGGCTTCGCG ATCGAGGCGC TGCATGGCTT CCTGGCCGCG
GCGCAGGTGC CGGGCGATCT GCGCTACTGC GGCAGCGAGG AGGCCGTGGC CTCGCTGCAC
CACGGCAGCT GCGACGTCGC GGGCTTCCAT GTGCCGCTGG GCGCGTTCGA GGCCGAAGCC
GTCGCGCACT ACGGGCCCTG GCTCAATGCC GATACGCAGA AGGTCATCGG CATGGCGACG
CGGCACCAGG GCCTGATGGT GGCGCCCGGC AACCCGAAGA AGATCTACAC GCCGGCCGAC
CTGGCGCGTT CCGATGTCCG CTTCATCAAC CGGCAGGCGG GCTCGGGCAC GCGCTACCTG
TTCGACCTGC AACTGCGCGA GCAGGGCATC GCGCCCGAGG CCATCAAGGG CTACGAGCAA
TGCGAGTTCA CGCATGCGGC CGTGGCGGCC TTCGTGGCCA GCGGCATGGC CGACGCGGGC
TACGGCGTGG AAACGCCGGC GCGCCAGTTC AAGCTGGACT TCATCTCCAA CCAGGTGGAG
CGCTACTTCC TGCTGTGCGA GGAGCGCTCG CTCGCCGCAC CCATCGTGCG GCGGATGCTG
GACATCCTGC AGAGCGAGGC CTACCAGAGC GCCGTGAACC GGCTGCCGGG CTACCAGGCG
GTGAACTGCG GCCGCGTGCT GTCGCTGCCC GAGGCCTTCG AGTCGCTTCG CCCCGCGCCG
GCCGGCAAGC GCCGCACGGC CACGCGGTCC TGA
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| Protein sequence | MHEVHIRPQW TIRQTDGAAL APRVIELLVQ VLEHGSLSSA CTASGVSYRH AWELIRQGEA
MFGQPLVVMQ RGKGSSLTPL GEKLVWADRR ITARLSPLLD SLASELGAEI EKLIPTAPTL
LRIHASHGFA IEALHGFLAA AQVPGDLRYC GSEEAVASLH HGSCDVAGFH VPLGAFEAEA
VAHYGPWLNA DTQKVIGMAT RHQGLMVAPG NPKKIYTPAD LARSDVRFIN RQAGSGTRYL
FDLQLREQGI APEAIKGYEQ CEFTHAAVAA FVASGMADAG YGVETPARQF KLDFISNQVE
RYFLLCEERS LAAPIVRRML DILQSEAYQS AVNRLPGYQA VNCGRVLSLP EAFESLRPAP
AGKRRTATRS
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