| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2897 |
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| Symbol | |
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| ID | 7970786 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 3043233 |
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| End bp | 3044423 |
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| Gene Length | 1191 bp |
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| Protein Length | 396 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 644793482 |
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| Product | drug resistance transporter, Bcr/CflA subfamily |
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| Protein accession | YP_002944783 |
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| Protein GI | 239815873 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00710] drug resistance transporter, Bcr/CflA subfamily
[TIGR00880] Multidrug resistance protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.151649 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCCTGC TGCTGGGCCT GCTCTCGGCC ATCGGGCCCT TCGCCATCGA CATGTACCTG
CCGGCGCTGC CGGCCATCGG CCAGGCGCTG CGCGCCGACA TCGGCGCGGT GCAGATGAGC
CTCACGGCGT TCTTTCTTTC GCTGGGTGCG GGCCAGCTGC TGTACGGGCC GGTCTCGGAC
ATGGTCGGGC GCAAGCCGCC GCTGTACGCC GGGCTGGTGC TGTTCGCGCT GGCGAGCGTG
GGCTGCGCGC TGGCCAGCGA CATCCACACG CTGATCGCGC TGCGCTTCGT GCAGGGCCTG
GGCGCGGCGG CCGGCATGGC GATTCCGCGC GCGGTGGTGC GCGACCTGCA CACCGGCACC
GATGCCGCGC GCCTCATGTC GCTGCTGATC CTGGTGTTCA GCGTGTCGCC GATCCTCGCG
CCGCTCGCGG GCAGCGCGGT GATTGCGGTG GCGGGCTGGC GCGGCGTGTT CTGGGCCGTG
ACCATTGCCG CGGTGGCGGG CCTTGCGATG ATGGTCACGC AGCTGCGCGA AACGCGGCCG
GCCTCGGAGC GCGTCGAGAG CAGCCTCGGC AGTGCCTTGT CGGCCTATTG GGTGCTGCTG
CGCGACTGGC ACTACCTGGG TCTGGTGTTC ATCGGCGGCT TTGCGATGGC GGGCTTCTTC
ACCTACCTGG CGAATTCGTC GTTCGTGATG ATCGACCACT ACGGCCTGTC GCCCGCGCTC
TACAGCGTGG CCTTCGGCGT GAACGCGGCG GCGTTCATCG GCGCCTCGCA GTTCACCGGT
TCGCTGGGCG AGCGCTTCGG GTTGGTGAGC CTTGTCAAGT TTGGCGTGGT GGCCTCGGGC
ATGGCGATGC TGGCCATGTT CGCGTACTTT GCCGCGGGCG GCGACAGCCT CTGGGTGCTG
ATCGTGCTGT ACTTCATCGC CTCCGGCTTC ATGGGCCTGG TGATCCCGAC CACCGGCGTG
CTGGCGCTGG AGATGCACGG CGCCATCGCA GGCACGGCCT CGGCGCTGCT CGGCACGCTG
CAGATGCTGA CCGGCGCACT GGCCATGGCG GTGGTAGGCC TCTTCACCGA CGGCCGCCCG
CTGCCGATGG TGGCCGGCAT GGCCGGCGGC GCGCTGATCG CGCTGGTGCT GACCTGGCTC
ACGCTGGGCA GCGTGCGTTC CGAACCCACG CGCAGGACGC AAGAGGCGTG A
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| Protein sequence | MALLLGLLSA IGPFAIDMYL PALPAIGQAL RADIGAVQMS LTAFFLSLGA GQLLYGPVSD
MVGRKPPLYA GLVLFALASV GCALASDIHT LIALRFVQGL GAAAGMAIPR AVVRDLHTGT
DAARLMSLLI LVFSVSPILA PLAGSAVIAV AGWRGVFWAV TIAAVAGLAM MVTQLRETRP
ASERVESSLG SALSAYWVLL RDWHYLGLVF IGGFAMAGFF TYLANSSFVM IDHYGLSPAL
YSVAFGVNAA AFIGASQFTG SLGERFGLVS LVKFGVVASG MAMLAMFAYF AAGGDSLWVL
IVLYFIASGF MGLVIPTTGV LALEMHGAIA GTASALLGTL QMLTGALAMA VVGLFTDGRP
LPMVAGMAGG ALIALVLTWL TLGSVRSEPT RRTQEA
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