| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2827 |
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| Symbol | |
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| ID | 7971040 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2973601 |
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| End bp | 2973831 |
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| Gene Length | 231 bp |
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| Protein Length | 76 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793412 |
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| Product | transport-associated |
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| Protein accession | YP_002944713 |
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| Protein GI | 239815803 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG2823] Predicted periplasmic or secreted lipoprotein |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0761193 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAACCCCG ATATTCAACT CAGGCACGAG GTCTTCGCCC AGCTGAACTG GGACCCGGCG
GTGTGCAGCT GCGATGTCGA CGTGCGCGTG GCCGACGGCG TGGTCACCTT GCATGGCCAG
CTGGCCAGCG AGGACCTGAA GAGCGCCGTC GAGCGCGCCG TGCGCCGGGC CGAAGGCGTC
ACGCTGATCG TCAACCGGCT GACCACCGCG GAATGCGCGA ACAATGACTG A
|
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| Protein sequence | MNPDIQLRHE VFAQLNWDPA VCSCDVDVRV ADGVVTLHGQ LASEDLKSAV ERAVRRAEGV
TLIVNRLTTA ECANND
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