Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2781 |
Symbol | |
ID | 7970994 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2928019 |
End bp | 2928924 |
Gene Length | 906 bp |
Protein Length | 301 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644793368 |
Product | Alpha/beta hydrolase fold-3 domain protein |
Protein accession | YP_002944669 |
Protein GI | 239815759 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0657] Esterase/lipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.286036 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCGCGA TCCCCCGGCC CGCCGGCATG GACGAACTGC TGCGCGAGGT CGGCCCGGTG TGGCAGCAGG ACATCCGCGG CGCGGGCGAC CGGGTCAAGG CCGCCTACCT GCCTGTGCTG ATGGCGGCGC CGCACGGCGG CGTCGACGTC ACGCGTGACC TTTCCTACGG ATCTCACGCG CGCCAACGGC TGGACGTCTA TTGTCCGGCC GTTGCGCGCG ACGCGCCCGT GGTGGTCTTC GTGCACGGCG GCGCTTTCGT GCGTGGCACC AAGGACATCA ACGATGCCAT GTACGCCAAC GTGCTGACCT GGTTCGCTCG CCAGGGTTGC GTGGGTGTCA ACGTGGAGTA CCGGCTGGCA CCGGAGGCGC CGCATCCGCA AGGCGCCCTG GACGTTGCCG CGGCCTGCGC CTGGGTGTCC GCGCACATCG GCGGCTTCGG TGGCGATCCG CGCAGCATCT GCCTGATCGG CCACTCCGCC GGCGGCACCC ATGCGGCGAC CTTCGCCTGC GATCCGGCGC TCGCCCATCT GCGGCGCGAC GTGTGCTGTC TGGTACTCGT GTCCGCGCGG CTGCAGGCCG ACAGCCTGCC GGAGAACCCC AACGCGGCCG GCGTGCGGGC GTATTTCGGC GAGGACGCAA GCCGCTATCC ATCCCTCTCG CCCATGGCGC ATGCGGCGCA CCTCGCAATG CCCGTGTTCG TCGTCAATGC GCAATACGAG AATCCGCTGC TCGACGTCTA TGCGACCGAG TTTGCCTATC GCGTGGCGGA GGCGCGCCGT GTCGCGCCGC GCCACATGAC GGTCGCGGAC CACAACCACG TCTCCGTCAT GGCGCATTTC AACAGCGGGG AGCAGCTGTT GGGCGAGCAG ATCCTCGACT TCTTCGCGGG CTCTTGTCGC CGGTAG
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Protein sequence | MRAIPRPAGM DELLREVGPV WQQDIRGAGD RVKAAYLPVL MAAPHGGVDV TRDLSYGSHA RQRLDVYCPA VARDAPVVVF VHGGAFVRGT KDINDAMYAN VLTWFARQGC VGVNVEYRLA PEAPHPQGAL DVAAACAWVS AHIGGFGGDP RSICLIGHSA GGTHAATFAC DPALAHLRRD VCCLVLVSAR LQADSLPENP NAAGVRAYFG EDASRYPSLS PMAHAAHLAM PVFVVNAQYE NPLLDVYATE FAYRVAEARR VAPRHMTVAD HNHVSVMAHF NSGEQLLGEQ ILDFFAGSCR R
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