| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2729 |
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| Symbol | |
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| ID | 7972329 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2876625 |
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| End bp | 2877764 |
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| Gene Length | 1140 bp |
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| Protein Length | 379 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644793315 |
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| Product | permease YjgP/YjgQ family protein |
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| Protein accession | YP_002944617 |
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| Protein GI | 239815707 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0795] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.447147 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTATTCC ATTCTTCCCT ACGCAAGGAG CTGTCGCGCA GCTTCGGAGC GACCCTCGTG
GTCCTGGTCA CCATCGTGAT GACCATGATG CTCATCCGCA CGCTCGGGCT CGCCTCCAAG
GGCAGCGTGA ACCCGTCCGA AGTGTTCCTC GTGATGGCGT ACACGGTGCT CGGCTACATG
CCGACCATCC TGAGCCTGAG CCTGTTCATC GCCATTGTCG GCACCTTGTC GCGCATGTAC
CGCGACAGCG AGATGGTGAT CTGGTTTTCC AGCGGACGGG GCCTGGCCGA TTTCGTCGAG
CCGCTGTTCC GCTTCGCCTG GCCGGTGCTG GTGCTGATCG CGGTGATGGC GCTGCTGGGC
TGGCCGTGGG CCAACTCGCA GACCATCGGC ATGCGGGCGC AATATGAAGG GCGCAGCGAC
ATCGAGCGGG TCACGCCGGG CGAATTCCGC GAATCGTCCG GGCGCATGCG GGTCTTCTTC
ATCGACAAGG ACACGCCGGA TGGCGCCACG GCCACCAACG TGTTCATCTG GGCGGTCGAG
CGCGGCCTGC AGATCACGAC CTCGGCGCGC AGCGGACGCA TCGAGAACGT CGGCAACAAC
CGCTTCCTGA TGCTGAGCAA CGGGCAGCGG CTGGAGCGGC CGCTGCTGCC CACCGCGGGG
CTCAAGATCA GCGAATTCGA GACCTATGGC ACCCGGGCCG GCGGCACCTC CGACTTCTCC
GCGGACAACA CGCCGGCGCG CGCCAAGCCC ACGCTCCAAC TGCTGCGCGA GCCCGGCGAC
GCCAGCCACG GCGAGCTGGC CTGGCGCATC GGCATGCTGC TGGCGGCCAT CAATTTCGTG
CTGCTGGCGC TGACGGTGTC GAGCGTCAAC CCGCGCGTGG GGCGAAGCGG CAACCTGCTG
TTCGCGCTGT TCGCCTTCGT CGTCTACTAC AACATGCTCA ACCTGGGCCA GAGCTGGATC
AGCTCCGGGC GCTTCAGCAT GGGCTCGTTC ATGCTGCTGC TGCACGGCGG CGTCCTGCTG
ATCGGCGTGG CATGGCTGCT CCTGCGCAAC AACAACTGGG GCCGCAGGCG CAGGACCGAG
CACGTCATGG CCGGCGGCCT GCCGCCTTCG CCGCCCTCGA AAATCGACCC GACCTCGTGA
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| Protein sequence | MLFHSSLRKE LSRSFGATLV VLVTIVMTMM LIRTLGLASK GSVNPSEVFL VMAYTVLGYM
PTILSLSLFI AIVGTLSRMY RDSEMVIWFS SGRGLADFVE PLFRFAWPVL VLIAVMALLG
WPWANSQTIG MRAQYEGRSD IERVTPGEFR ESSGRMRVFF IDKDTPDGAT ATNVFIWAVE
RGLQITTSAR SGRIENVGNN RFLMLSNGQR LERPLLPTAG LKISEFETYG TRAGGTSDFS
ADNTPARAKP TLQLLREPGD ASHGELAWRI GMLLAAINFV LLALTVSSVN PRVGRSGNLL
FALFAFVVYY NMLNLGQSWI SSGRFSMGSF MLLLHGGVLL IGVAWLLLRN NNWGRRRRTE
HVMAGGLPPS PPSKIDPTS
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