| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2712 |
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| Symbol | |
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| ID | 7972312 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2855977 |
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| End bp | 2856747 |
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| Gene Length | 771 bp |
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| Protein Length | 256 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 644793298 |
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| Product | hypothetical protein |
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| Protein accession | YP_002944600 |
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| Protein GI | 239815690 |
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| COG category | [K] Transcription |
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| COG ID | [COG4271] Predicted nucleotide-binding protein containing TIR -like domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAAG TCGGGCGTGC GATGGCTAAG CTGGCGGCCA TCCAAAAGGC TGTGGAGTCT
GCGGTTAACG AGGTAATCAA TCGGAGCCGC ATGGGGCCAA AGGAGCCTGC GCAGTACCGC
CGCCACTACG ATAGCTCCGC AGTTGGTATG TATTTCACAC AGGCAGCGCA GCAGCTTGGG
GTCTTGCGCA AGGAACTCCC AGACTGGTTT GGGGATTTTC AAGACCTAGC TGTCGATCCG
GACGTGGTTC CCAATGCCTA TTCGCCGGGT CGCCTGAAGC AACTCTCCCG AGACATCGGA
CAGATGATGG AAATTCGTGC GAACTCTGAG CACGCAAGTC ACGTCATCAA GGAGCCCCAG
CGACGCGCGT TCATCTCTCA TGGGCGGTCG AAGGACTGGT ACGAAGTGCA GGCCCACATT
GAGCGGGACC TGAAGCTGCG GACATTGGAG CTTGCGCAAG AAGCCAGTCA AGGGCGCACG
ATCGTAGAGA AGCTAGAGGC AGAGGCATCG TCCTGCGACT CAGCGGTGAT TGTCATGAGC
GGAGATGACA CCGACAGCGC CGGGAACCCC CGAGTTCGCG AGAACGTTAT GCACGAGATC
GGCTACTTCC AAGGTCGGTA TGGCCGTCGC TGCGTGATCC TCCTTCATGA GGAAGGGGTC
AGCGTGCCGA CTAACCTTGC AGGAATCGTG TATGTCCCTT ACCCGAAAGA CACTATTGCA
GCTACGTTTG GTGTACTTGA TCGTGAACTG AGATCACTGT ACGGCGACTA G
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| Protein sequence | MSEVGRAMAK LAAIQKAVES AVNEVINRSR MGPKEPAQYR RHYDSSAVGM YFTQAAQQLG
VLRKELPDWF GDFQDLAVDP DVVPNAYSPG RLKQLSRDIG QMMEIRANSE HASHVIKEPQ
RRAFISHGRS KDWYEVQAHI ERDLKLRTLE LAQEASQGRT IVEKLEAEAS SCDSAVIVMS
GDDTDSAGNP RVRENVMHEI GYFQGRYGRR CVILLHEEGV SVPTNLAGIV YVPYPKDTIA
ATFGVLDREL RSLYGD
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