| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2679 |
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| Symbol | |
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| ID | 7972278 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2823140 |
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| End bp | 2823916 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793267 |
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| Product | glycosyl transferase family 2 |
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| Protein accession | YP_002944570 |
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| Protein GI | 239815660 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0463] Glycosyltransferases involved in cell wall biogenesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0184474 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCAGACG CCTCGCGCAC ACACCTTGTC CTGATCCCCA GCTACAACAC GGGCGAACGC
CTGTTCTCCA CGGTCGAAGC GGCACGCGCG CAGTGGAGCC CGGTCTGGGT GGTGGTGGAC
GGCAGCACCG ACGGCACCGG CGAGCGCCTG CAGCAGATGG CTGCCGGCGA CCCGGGCCTT
CGGGTCTGGC TGCTGCCGCA GAACCAGGGC AAGGGCGCGG CCGTGCTGCA CGGCCTGCGC
GCGGCGCGCG AGGCCGGCTT CACGCATGCG CTGACCATGG ACTCGGATGG CCAGCATCCG
GCCGACCTGA TTCCCGCCTT CATGAAGGCA TCGCAGGCAC GGCCCGAGAC CATGGTGCTG
GGCCGCCCGG TGTTCGATGC CTCCGCCCCG CTGTTGCGCG TGCGCGGACG GCGCGTGTCC
AATGGCTGGA CCCAGCTCGA AACCCTGTTT GCCGGCGTCG GCGATTCGCT CTACGGATTC
CGCGTGTACC CGGTGGCCGA CCTGATCGCT GTGATGGCGC GACAGCCCTG GATGCGGCGC
TTCGACTTCG ACACCGAGGC CGTCGTGCGG CTGGCCTGGC GCGGCGTCAA GCCCGTGAAC
ATCGACGCGC CGGTGAAGTA CCTGAGCGCC GAGGAAGGCG GGGTCTCGCA CTTTCGCTAT
GGGCGCGACA ACGTGCTGCT GACGTGGATG CACGCGCGGT TGATGGTCGA GTTCGTGGTG
CGGCTGCCGG GGCTGGTTTT CCGCAAGCTG CGCGGGATTG CGCCGTTTCA GAAATAG
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| Protein sequence | MPDASRTHLV LIPSYNTGER LFSTVEAARA QWSPVWVVVD GSTDGTGERL QQMAAGDPGL
RVWLLPQNQG KGAAVLHGLR AAREAGFTHA LTMDSDGQHP ADLIPAFMKA SQARPETMVL
GRPVFDASAP LLRVRGRRVS NGWTQLETLF AGVGDSLYGF RVYPVADLIA VMARQPWMRR
FDFDTEAVVR LAWRGVKPVN IDAPVKYLSA EEGGVSHFRY GRDNVLLTWM HARLMVEFVV
RLPGLVFRKL RGIAPFQK
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