Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2674 |
Symbol | |
ID | 7972273 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | + |
Start bp | 2817447 |
End bp | 2819855 |
Gene Length | 2409 bp |
Protein Length | 802 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 644793262 |
Product | hypothetical protein |
Protein accession | YP_002944565 |
Protein GI | 239815655 |
COG category | [R] General function prediction only |
COG ID | [COG4258] Predicted exporter |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.22432 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGGAGC GCGAGACCGG GGAGCGCGGC CCGCCGGGCT GGCAGCGCCG GGCGCTGGTG CTGCTGGTCT GGGCGCTGGT GCTGCTCGGC GGCGCGCTGC AGATCGCGCG CACGCAGTTC AGCGCCGACC TTTCCGCCTT CCTGCCCAAG AGCCCCGACG CGCGGCAGCA GGTGCTCATC GAGCAGCTGC AAAGCGGCGT GGCCTCGCGC ACGCTGATGC TCGGCATCGA GGGCGGCGCG AGTGCCGAGC AGCGCGCGGC CGTATCGCGC GCCGTGGCCA AGTCCATGCG CGAGAGCCGG CTCTTCGACC TGATCCAGAA CGGCGACACC GGCGACTGGA GCGAGGCCGG CACCTGGGTC TTCGCGCACC GCTACCAGCT TTCGCCGGGC GTCCGGCCCG AGCATTTCAC CGCCGAAGGC CTGCGCGACG CGATCTACGA AACGCTGTCG ATGCTCGGCA CGCCGGCCGG CAACGCGATC AAGCCCTTGC TCGACCGCGA TCCCACCGGC GAGACCCAGC GCATTGCCGT CGAGCTGACG CCGGCCAGCG CGCCGCGCAG CGAAGACGGC GTCTGGATGT CGCGCAGCGC GCCGCGGGCG CTCATGATCG TCACCACGCG CGCGGCGGGC AGCGATCTCG ACGCCCAGGC GCAAACCATT GCAAGCGTGC ACGCGGCCTT CGATGCCGCC ACGCGCGGCA TGGAAGAGGC CACCCGGCCG AAGCTGCTGC TGAGCGGCCC GCCCGTGTTC TCGGTGCTGA GCCGCGACAA GATCAAGACC GAAGCGATCC ACCTCGCGAT CGTGGGCGGC ATCGTGATGG GCGGCCTGCT GCTGCTGGCC TTCGCGTCGC CGCGCGCGCT GGTCATCGCG TTCCTGCCCG TGGCCACCGG CGTGGTGGTG GGGACCGCGG CGGTCAGCGT GGTGTTCGGC TCGGTGCACG GCATGACGCT GGGCTTCGGC AGCACGCTGA TCGGCGAGAC CGTCGACTAC GCCATCTACT ACCTGATCCA GGCGCGCGGC GCGGCCGTGG CCGGCACCGG CTGGGCGCGC TGGCGCGATG TGCACTGGCC CACCGTGCGG CTCGGGCTGC TGACCTCGGT GTGCGGCTTC GCGGCGCTGG TGTTCTCGGG ATTCCCGGGC CTGGCGCAGC TGGGCGTGTT CTCCATCGCA GGGCTCGTGG CCGCGGCGCT GGCCACGCGC TACGCATTGC CCATGCTCGC GCCCGATGGC GCCACCGGCA TGGGCATGCG CCGCTACATG GCGCGCGCGG CCGGCGTGCT CGTGCGCGGC CTGCCGCACC TGCGCTGGAT GCTTGCGGGG CTCGGCGTGG CTGCGCTGGT GCTGGTCATC TGGCAGGGCG GCCATCTGTG GCGCGCCGAC CTCGGCGCCA TGAGCCCGGT GCCCAAGTCG GCCCAGCAGC TCGACGAGAT GCTGCGCGCC GACATCGGCA CCGGCGACGG CGGCACGCTG GTGGTGGTGT ACGGCGCCGA TGAAGAAACC GCACTGCGCA ACACCGAAGC CGCCACCGCG CGGCTCGAAG CCCTGGTCGA CAAGGGCGAG CTCGGCGGCT TCGAGGCCGT GACGCGCGTG CTGCCGAGCA TCGCGACGCA GTCGGCCCGG CTCGCGAGCC TGCCCGACGG CGAGACGCTG CGCAGCCGGC TGGCCGAAGC CACCCAAGGC TCGCCGCTGC CGGCCTCGCG CCTCGGCCCT TTCCTGGCCG ATGTCGAAGC CGCGCGCAAG CTCGCGCCCG TGCGGCGCGC CGACCTGGCG GGCGGGCCGC TCGGCTCGGT CGTCAACACG CTCATGTACC AGCGCCCGGG CGGCGGCTGG TCGACGCTGG TGGTGCTGCA CCCCGGGGCA AAGTTCGACG CGCGCCGGCT CGAAGCGGCG CTGGCGGGCG TGCCCGAGGT GCAGGTGGTC GACGTGGGCC GCGAACTCGC GGGGCTCTAT CAGCGCTACC TGCACGAGGC CTTCGTGCAG GTGCTGCTCG GCGCGCTGGC GGTGGTGGTG CTGTTGGGCA TCTACCTGCG CTCGGGCCGG CGGCTGCTCG CGGTGTGCCA GCCGCTGCTG TTCGCGGTGG TGCTCACGCT GGGCGGCATG GCCGTGCTCC AGGTGCCGCT GGGCATCCTG CACCTGGTGG GGCTGCTGCT GATCGTGGCG GTGGGCTCCA ACTACGCGTT GTTCTTCGAC CAGCTGCGCG TGGCCGGGCG GGCCGACGAG GACACGCTGG CGTCGCTGAT GCTGGCCAAC CTCACCACGG TGGTGTCTTT CGGGCTGATC GCGATCTCGG ACATTCCGGC GCTGTCGTCG ATCGGCCGCG TGGTGGCGCC GGGCGCCTTG CTGGCGCTGC TGCTGTCGGC CGCGTTTGCG CGCCGCGTGG CGCCCACGCC GCCCGCCGCG CGCGGCTGA
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Protein sequence | MKERETGERG PPGWQRRALV LLVWALVLLG GALQIARTQF SADLSAFLPK SPDARQQVLI EQLQSGVASR TLMLGIEGGA SAEQRAAVSR AVAKSMRESR LFDLIQNGDT GDWSEAGTWV FAHRYQLSPG VRPEHFTAEG LRDAIYETLS MLGTPAGNAI KPLLDRDPTG ETQRIAVELT PASAPRSEDG VWMSRSAPRA LMIVTTRAAG SDLDAQAQTI ASVHAAFDAA TRGMEEATRP KLLLSGPPVF SVLSRDKIKT EAIHLAIVGG IVMGGLLLLA FASPRALVIA FLPVATGVVV GTAAVSVVFG SVHGMTLGFG STLIGETVDY AIYYLIQARG AAVAGTGWAR WRDVHWPTVR LGLLTSVCGF AALVFSGFPG LAQLGVFSIA GLVAAALATR YALPMLAPDG ATGMGMRRYM ARAAGVLVRG LPHLRWMLAG LGVAALVLVI WQGGHLWRAD LGAMSPVPKS AQQLDEMLRA DIGTGDGGTL VVVYGADEET ALRNTEAATA RLEALVDKGE LGGFEAVTRV LPSIATQSAR LASLPDGETL RSRLAEATQG SPLPASRLGP FLADVEAARK LAPVRRADLA GGPLGSVVNT LMYQRPGGGW STLVVLHPGA KFDARRLEAA LAGVPEVQVV DVGRELAGLY QRYLHEAFVQ VLLGALAVVV LLGIYLRSGR RLLAVCQPLL FAVVLTLGGM AVLQVPLGIL HLVGLLLIVA VGSNYALFFD QLRVAGRADE DTLASLMLAN LTTVVSFGLI AISDIPALSS IGRVVAPGAL LALLLSAAFA RRVAPTPPAA RG
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