| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Vapar_2654 |
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| Symbol | |
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| ID | 7972416 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Variovorax paradoxus S110 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012791 |
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| Strand | - |
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| Start bp | 2797993 |
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| End bp | 2799273 |
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| Gene Length | 1281 bp |
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| Protein Length | 426 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644793242 |
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| Product | cytosine deaminase |
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| Protein accession | YP_002944545 |
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| Protein GI | 239815635 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.689557 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCTCGACC TCCTCGTCAT CAACGCCACC CTCCCCGACG GCCGCTCGGG CATGTCGATT
GCCGTGCAGG GCGGCCGCAT TGCCGAAGTC ACCGCCGGGC TCGACGCGCC GGCGCTCGAC
AAGCTCGATG CCCAGGGCCT GCTGGTTGCG CCGCATTTCG TCGATCCGCA CTTCCACATG
GACGCCACGC TGAGCTATGG CCTTCCGCGC ATCAACCAGA GCGGCACCTT GCTCGAAGGC
ATTGCGCTGT GGGGCGAACT CAAGCCGCTG CTCACGGCCG ACGCACTCAT CGAGCGTGCG
CTGGCGTATT GCGACTGGGC GGTGGCCAAG GGCCTGCTGG CCGTGCGCTC GCATGTGGAC
ACGAGCGACC CGAGCCTGCT CGCGGTCGAT GCGCTGCTCG AGGTCAAGCG CAAGGTCGCG
CCGTACCTCG ACCTGCAGCT CGTGGCCTTT CCGCAGGATG GCGTGCTGCG CTCGGCAGGC
GGCGTCGACA ACCTGAAGCG CGCGCTCGAC AAGGGCGTGG ACGTGGTCGG CGGCATTCCG
CATTTCGAGC GCACCATGGC CGATGGCGCC GCCAGCGTGA AGCTGCTGAT GGAGCTGGCG
GCCGAGCGCG GCAAGCTGGT CGACATGCAC TGCGACGAGT CGGACGATCC GCTCTCGCGC
CACATCGAAA CCCTGTCGGC CGAGACCTGG CGCCTCGGCA TGCAGGGCCG CGTGACCGGC
TCGCACTGCA CCTCGATGCA TTCGATGGAC AACTACTACG CGAGCAAGCT GCTGCCGCTG
ATCGCGCAGA GCGGCGTCAG CGTGGTTTCC AACCCGCTCA TCAACATCAC GCTGCAGGGC
CGCCACGACA GCTATCCCAA GCGCCGCGGC ATGACGCGCG TGCCCGAGCT GATGGCCGCC
GGCGTGAACG TCGCCTTCGG CCACGACTGC GTGATGGACC CGTGGTACGG CATGGGATCG
GGCGACATGC TCGAAGTAGC GCACATGGGC CTGCACGTGG CGCAGATGAC CAGCCAGGCC
GGCATCCGCC AGTGCTTCGA CGCGGTGACC ACGAACGCCG CGCGCGTGAT GCACCTCGAA
GGCTACGGCC TCGAGGCGGG CTGCGACGCG AGCTTCGTGC TGCTGCAGGC GCGCGACCCG
GTCGAAGCGA TCCGGCTGCG CGCGACGCGG CTCAAGGTGT TCCGCAAGGG GCGCCTGCTG
GCGGAAACGC CGGCCGCGAC GGCCGCGCTG CACCTGCCGG GGCGCGCGCA GTCCACCAGC
TGGATGAGCC GCAAGTCCTA G
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| Protein sequence | MLDLLVINAT LPDGRSGMSI AVQGGRIAEV TAGLDAPALD KLDAQGLLVA PHFVDPHFHM
DATLSYGLPR INQSGTLLEG IALWGELKPL LTADALIERA LAYCDWAVAK GLLAVRSHVD
TSDPSLLAVD ALLEVKRKVA PYLDLQLVAF PQDGVLRSAG GVDNLKRALD KGVDVVGGIP
HFERTMADGA ASVKLLMELA AERGKLVDMH CDESDDPLSR HIETLSAETW RLGMQGRVTG
SHCTSMHSMD NYYASKLLPL IAQSGVSVVS NPLINITLQG RHDSYPKRRG MTRVPELMAA
GVNVAFGHDC VMDPWYGMGS GDMLEVAHMG LHVAQMTSQA GIRQCFDAVT TNAARVMHLE
GYGLEAGCDA SFVLLQARDP VEAIRLRATR LKVFRKGRLL AETPAATAAL HLPGRAQSTS
WMSRKS
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