Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Vapar_2629 |
Symbol | |
ID | 7972391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Variovorax paradoxus S110 |
Kingdom | Bacteria |
Replicon accession | NC_012791 |
Strand | - |
Start bp | 2774123 |
End bp | 2775229 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644793217 |
Product | aminoglycoside phosphotransferase |
Protein accession | YP_002944520 |
Protein GI | 239815610 |
COG category | [R] General function prediction only |
COG ID | [COG3173] Predicted aminoglycoside phosphotransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0566206 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCCAGG ACTTCTCCAA CTTCATCGGC ACCCGTGCGG TCTCGCAGCA GCATGCCTTC GACGTCGAGG CGCTCGCCGC GTGGCTGGCG AAGAACCTCG ACGGCTTCCA GGGACCGCTG ACGGTCGAGA TGTTCAAGGG CGGGCAATCG AACCCGACCT ACAAGCTCGT CACGCCCACG CAGAGCTACG TGATGCGCGC CAAGCCGGGC CCGGTTGCCA AGCTGCTGCC CTCGGCCCAT GCGGTGGAGC GTGAATTCAA GGTCATGAGC GGCCTGGCCG GCACCGGCGT GCCCGTGCCG CGCATGCATT GCCTGTGCGA GGACGAAGCC GTGATCGGCC GCGCTTTCTA CGTGATGGAG TTCATGCAGG GCCGCGTGCT GTGGGACCAG GCCCTGCCCG GCATGGACAA CGCCGGGCGC GCGGCCATCT ACGACGAGAT GAACCGCGTC ATCGCGGCGC TGCACACCGT GAAGTTCGCC GAGCGCGGCC TTGCGGACTA CGGCAAGCCC GGCAACTACT TCGAGCGCCA GATCGGCCGC TGGAGCAAGC AGTACAAGGC CTCGGCCGAT GGCGCCGGTG AACTGTCGCA GCCGATCGAG GCCATGGAGC GCCTGATCGA CTGGCTTCCC GCCCATATGC CGGCGAGCGC GCGCGACGAG ACCAAGGTTT CGATCGTCCA TGGCGACTAC CGCCTGGACA ACGTGATGTT CCATGCCACG GAGCCGCGGA TCATCGCGGT GCTCGACTGG GAGCTCTCCA CGCTGGGCCA TCCGCTGGCG GACTTCAGCT ACCACTGCAT GTCCTGGCAC ATGCCCCCCA CCACGGGCCG CGGCATCGGC GGCGTGGATG TCGCGGCGCT GGGCATACCC ACCGAGAGCG AATACATCCG CCGCTACTGC GAGCGCACGC GCATCACCAC GCCCGAGGCG CTGGCGCCCG ACTGGAATTT CTACCAGGCC TACAACCTGT TCCGCATGGC CGCGATCCTG CAAGGCATTG CCAAGCGGGT CGAGGCAGGC ACCGCATCGA GCGAGCAGGC CGTGGCTTCG GCCCGCGGCG CGCGCCCCAT GGCCGAAATG GCCTGGCAGT TTGCCCAGAA GGCATAA
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Protein sequence | MSQDFSNFIG TRAVSQQHAF DVEALAAWLA KNLDGFQGPL TVEMFKGGQS NPTYKLVTPT QSYVMRAKPG PVAKLLPSAH AVEREFKVMS GLAGTGVPVP RMHCLCEDEA VIGRAFYVME FMQGRVLWDQ ALPGMDNAGR AAIYDEMNRV IAALHTVKFA ERGLADYGKP GNYFERQIGR WSKQYKASAD GAGELSQPIE AMERLIDWLP AHMPASARDE TKVSIVHGDY RLDNVMFHAT EPRIIAVLDW ELSTLGHPLA DFSYHCMSWH MPPTTGRGIG GVDVAALGIP TESEYIRRYC ERTRITTPEA LAPDWNFYQA YNLFRMAAIL QGIAKRVEAG TASSEQAVAS ARGARPMAEM AWQFAQKA
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