Gene Vapar_2568 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagVapar_2568 
Symbol 
ID7970045 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameVariovorax paradoxus S110 
KingdomBacteria 
Replicon accessionNC_012791 
Strand
Start bp2711717 
End bp2712268 
Gene Length552 bp 
Protein Length183 aa 
Translation table11 
GC content72% 
IMG OID644793155 
ProductPhosphoglycerate mutase 
Protein accessionYP_002944460 
Protein GI239815550 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.691388 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGT GGCTGGTGCG CCATGCGCAG ACAGACGCCG CGCCGGGCCT TTGCTACGGC 
CGCACGGATG TGGGCGTGCC GGCCGAGGCG ACGCTGGCGG TGGCGCATGC GGTGGCTTCG
CGCCTGCCCG CGGACCTGGC GCTGGCGCAC TCGCCCCTGC GGCGCTGCGC CGAACTCGCG
CAGACCATCG GCAGGCTGCG TCCGGACCTT GCCACGCGCG CCGATCCGCG CCTCGCCGAG
ATGGATTTCG GCGCCTGGGA AGGCCGGCCC TGGTCGTCGA TTGCCCGCGC CGAGTTCGAG
GCGTGGACCT GCAATTTCGC CGAAGGGTGC CCGGGTGGGC ATGGCGAAAG CACGGCCCGC
TTCATGCAGC GCATCGGCAC GGCCTTCGAT GAATGGCGCG CGTCGGGGCA GGACGCGGTG
TGGGTCACGC ATGCGGGCGT GATGCGGGCG GTGGAGCTGC TGCATCGCGG CGTGCGGCGC
GTCGACGATG CCGCGCAGTG GCCGTCGGCG CCCATTGACT ATGGGGCGTG CCAGCTGATC
GAATGCAGCT GA
 
Protein sequence
MKLWLVRHAQ TDAAPGLCYG RTDVGVPAEA TLAVAHAVAS RLPADLALAH SPLRRCAELA 
QTIGRLRPDL ATRADPRLAE MDFGAWEGRP WSSIARAEFE AWTCNFAEGC PGGHGESTAR
FMQRIGTAFD EWRASGQDAV WVTHAGVMRA VELLHRGVRR VDDAAQWPSA PIDYGACQLI
ECS